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TGCAGATCTACAGATGGCAACAGATAGCTTTAGCTTCGACAACCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAATGATGGAAAGgtatgctatatatcttcatgtcacaattcatatgtgtttcccacaaaagttttcttgacttgtgtctttaagatcttcgaaaccaggactaatatcttta...
species | Zea mays |
transcript | GRMZM2G153393_T01 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GAGAGGGTACTTTTGGACGAGTTTACAGGGCACAATTCAATGATGGAAAG GTTCTGGCGATCAAGAAATTAGATAGTACTGTGATGCCATTTCAATCATCTEST: gi|60346344|gb|DN213317.1|DN213317
genomic: GAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAATGATGGAAAGgtatgctata ... ttttatctagGTTCTGGCGATCAAGAAATTAGATAGTACTGTGATGCCATTTCAATCATCT
EST: GAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAATGATGGAAAG GTTCTGGCGATCAAGAAATTAGATAGTACTGTGATGCCATTTCAATCATCTEST: gi|111145781|gb|EE258166.1|EE258166
genomic: GAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAATGATGGAAAGgtatgctata ... ttttatctagGTTCTGGCGATCAAGAAATTAGATAGTACTGTGATGCCATTTCAATCATCT
EST: GAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAATGATGGAAAG GTTCTGGCGATCAAGAAATTAGATAGTACTGTGATGCCATTTCAATCATCT
genomic: GAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAATGATGGAAAGgtatgctata ... ttttatctagGTTCTGGCGATCAAGAAATTAGATAGTACTGTGATGCCATTTCAATCATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCAGATCTACAGATGGCAACAGATAGCTTTAGCTTCGACAACCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAATGATGGAAAGgtatgctatatatcttcatgtcacaattcatatgtgtttcccacaaaagttttcttgacttgtgtctttaagatcttcgaaaccaggactaatatcttta
- - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacaaaag