1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ACCTACATTTTGCCTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaatcatgcaaatatttctgatccagtgttctactctttcaagtttgtaagcagcgctttagtgagaaattgactgaaagaggaatgctaaagg...
species | Zea mays |
transcript | GRMZM2G134888_T01 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAG ATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTGEST: gi|78107411|gb|DV525829.1|DV525829
genomic: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaat ... tgattcgcagATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTG
EST: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAG ATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTGEST: gi|94477484|gb|EB706442.1|EB706442
genomic: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaat ... tgattcgcagATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTG
EST: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAG ATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTGEST: gi|71774552|gb|DR972430.1|DR972430
genomic: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaat ... tgattcgcagATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTG
EST: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAG ATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTGEST: gi|37375777|gb|CF624353.1|CF624353
genomic: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaat ... tgattcgcagATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTG
EST: CTTGCACGTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAG ATAGCAGCTTGCTCGTTCATCATAGTTGTCAGGGTTTGCTGTGCCTACGTGEST: gi|211253075|gb|FL452728.1|FL452728
genomic: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaat ... tgattcgcagATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTG
EST: CTTGCGCGTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAG ATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTGEST: gi|149101391|gb|EE187509.2|EE187509
genomic: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaat ... tgattcgcagATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTG
EST: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAG ATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTG
genomic: CTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaat ... tgattcgcagATAGCAGCTTGCTCGTTCATCATAGTTGTCGGGGTTTGCTGTGCCTACGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTACATTTTGCCTTGCGCTTGTTTTTTGGCGATCCTCAAGACAAAAGTGGGGTGGCATCAGgtatgaaaatcatgcaaatatttctgatccagtgttctactctttcaagtttgtaagcagcgctttagtgagaaattgactgaaagaggaatgctaaagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagaggaa