1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
GTCTCTTTGGAACTTGGTGGGAATGCACCTTGCATTGTTTTTGATGATGCAGACATTGATGTTGCTGTTAAAGGCAGTgtaagactcacttttacatttatcttctttgtttctttactagcatacaattatataaaatcatctcaagttcccttggtgaatgagggtgacattatct...
species | Zea mays |
transcript | GRMZM2G128114_T02 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CTTGCATTGTTTTTGATGATGCAGACATTGATGTTGCTGTTAAAGGCAGT CTTGCTGCCAAGTTCCGTAACAGTGGACAGACATGTGTTTGTGCAAACAGGEST: gi|32837759|gb|CD977437.1|CD977437
genomic: CTTGCATTGTTTTTGATGATGCAGACATTGATGTTGCTGTTAAAGGCAGTgtaagactca ... atgtgtgcagCTTGCTGCCAAGTTCCGTAACAGTGGACAGACATGTGTTTGTGCAAACAGG
EST: CTTGCATTGTTTTTGATGATGCAGACATTGATGTTGCTGTTAAAGGCAGT CTTGCTGCCAAGTTCCGTAACAGTGGACAGACATGTGTTTGTGCAAACAGGEST: gi|67026356|gb|CO455105.1|CO455105
genomic: CTTGCATTGTTTTTGATGATGCAGACATTGATGTTGCTGTTAAAGGCAGTgtaagactca ... atgtgtgcagCTTGCTGCCAAGTTCCGTAACAGTGGACAGACATGTGTTTGTGCAAACAGG
EST: CTTGCATTGTTTTTGATGATGCAGACATTGATGTTGCTGTTAAAGGCAGT CTTGCTGCCAAGTTCCGTAACAGTGGACAGACATGTGTTTGTGCAAACAGG
genomic: CTTGCATTGTTTTTGATGATGCAGACATTGATGTTGCTGTTAAAGGCAGTgtaagactca ... atgtgtgcagCTTGCTGCCAAGTTCCGTAACAGTGGACAGACATGTGTTTGTGCAAACAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTCTTTGGAACTTGGTGGGAATGCACCTTGCATTGTTTTTGATGATGCAGACATTGATGTTGCTGTTAAAGGCAGTgtaagactcacttttacatttatcttctttgtttctttactagcatacaattatataaaatcatctcaagttcccttggtgaatgagggtgacattatct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT