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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacag

Basic information

species Zea mays
transcript GRMZM2G070422_T03
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G070422_T03 (Zea mays), 5'ss of exon 11
lower sequence: LOC_Os08g23810.1 (Oryza sativa), 5'ss of exon 12
GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctct-tgttgaacag
| ||| | || ||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||||| ||||  |     | ||  |  || |||||| | || |||  |||||        ||||| ||||    ||||  ||||| ||    |   ||||           ||| ||  | | ||| ||||||
GTCCTTTGGGAAGCCGAGCTGCCAAGGCAATTGGATTCATTGAGAAGATGATAGAATACTCTTATGTTAATGCACCGTTGCAGAAAGAACTGTTGGCAGgtccaaaacc-gccttatttctctgttacatatg-cttcttgttt--------tatttaaaaga--acaac--ttttcatccagatatactctaac------gaaagcattttgtatgtcgaacag

upper sequence: GRMZM2G070422_T03 (Zea mays), 5'ss of exon 11
lower sequence: PP1S29_256V6.2 (Physcomitrella patens), 5'ss of exon 12
GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacag-----------------------------------------------------------------------
| ||  |    ||| |||| |||||||| ||||| ||||||||  | |||||  | ||||| | || ||||||||||||||| |||||||||   || ||| ||  |  | | |      | |||||  |  | ||    |||   || |  || |  |  | || ||| | |    |  | ||| | ||     || |  ||| ||  |  |||||| ||                                                                          
GTCCCTTGAAAAGCAGAGCGGCTAAGGCTATTGGTTTTATTGATGACATGATCAACTACTCCTCTGCTAATGCACCATTGCAAAAGGAGCTGGAAGCAGgtgaggttgataattatg--ttgtgttatatcaggctcttcgtt--gtctcaataatgcagggttgacaatcctcaa-tggaaagtacacttcacattttatacacgtcaga-cttgtttaatgctgtttgaaccttcctctttctctgttttcaagtctattctgacaatatcactatcgtgtgttgatgtacag

upper sequence: GRMZM2G070422_T03 (Zea mays), 5'ss of exon 11
lower sequence: EFJ10940 (Selaginella moellendorffii), 5'ss of exon 10
GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacag
| ||  |    ||| ||||||| |||||||| ||||| |||||||||||||| || |||||  | |  ||  | ||  |||| |  || ||    ||||||  | |||   |    |  ||| | |   | ||  |||||     |   | |||| |             || |||   |||||                                        
GTCCCTTGAAAAGCAGAGCTGCCAAGGCAATCGGATTCATTGAGAAGATGATCGATTACTCCAAGGCAAACTCTCCCCTGCAAAGAGATCTCGAAGCTGgt--gcgttaaaaactttggcttggcttgct-tggtttgct----tacttcgctatata------------ctcttttcgcacag----------------------------------------

upper sequence: GRMZM2G070422_T03 (Zea mays), 5'ss of exon 11
lower sequence: EFJ25882 (Selaginella moellendorffii), 5'ss of exon 10
GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacag
| ||  |    ||| ||||||| |||||||| ||||| |||||||||||||| || |||||  | |  ||| | ||  |||| |  || ||    ||||||    |||   |    |  ||| | |   | ||  |||||     |   | |||| |             || |||   |||||                                        
GTCCCTTGAAAAGCAGAGCTGCCAAGGCAATCGGATTCATTGAGAAGATGATCGATTACTCCAAGGCAAATTCTCCCCTGCAAAGAGATCTCGAAGCTGgt--acgttcaaaactttggcttggcttgct-tggtttgct----tacttcgctatata------------ctcttttcgcacag----------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32864419|gb|CF004101.1|CF004101
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7145508|gb|AW506989.1|AW506989
EST:     GATAGAGTACTCATATGTTAATGCCCCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGTGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211297572|gb|FL439289.1|FL439289
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|60345014|gb|DN211987.1|DN211987
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7145192|gb|AW506673.1|AW506673
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|116819942|gb|EC863109.1|EC863109
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32933638|gb|CF038450.1|CF038450
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACCACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCC
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAA-CACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCC
EST: gi|211078513|gb|FL462572.1|FL462572
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|14191336|gb|BG833566.1|BG833566
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAAC-CAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|60396705|gb|DN229571.1|DN229571
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|16926451|gb|BM079519.1|BM079519
EST:     GCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|33101843|gb|CF061803.1|CF061803
EST:     GTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7216968|gb|AW563090.1|AW563090
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7216969|gb|AW563091.1|AW563091
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211104013|gb|FL460612.1|FL460612
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32935670|gb|CF040482.1|CF040482
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|9254476|gb|BE344944.1|BE344944
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6012366|gb|AW061722.1|AW061722
EST:     GGAGCTGTTGGCTG                         ATAAGGTGGGGAACACAGCTGCATTCCTGGTTTTTTCATTGGCTTTTGCCA
genomic: GGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211104012|gb|FL460611.1|FL460611
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6466754|gb|AW191414.1|AW191414
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6827701|gb|AW331344.1|AW331344
EST:     GAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7145191|gb|AW506672.1|AW506672
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211373107|gb|FL457929.1|FL457929
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|44901425|gb|CK827970.1|CK827970
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|211297571|gb|FL439288.1|FL439288
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|32933113|gb|CF037925.1|CF037925
EST:     ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCCGCATTCCTGGTTTCTTCATTGGTTTCTGCCA
genomic: ACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|7145190|gb|AW506671.1|AW506671
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGACTTCTGCC
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGG-CTTCTGCC
EST: gi|116826086|gb|EC869836.1|EC869836
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
EST: gi|6057037|gb|AW091442.1|AW091442
EST:     GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTG                         ATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA
genomic: GATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1199

GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 663

GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 256

GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 3377

GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttt ... tgttgaacagATGAGGTGGGGAACACAGCTGCATTCCTGGTTTCTTCATTGGCTTCTGCCATCACCGGCTCGACTGTTTATGTTGACAATGGGCTCAATACAATGGGGCT


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCCCTCTTGGGAGCCGAGCTGCTAAGGCAATTGGATTTATTGAGAAGATGATAGAGTACTCATATGTTAATGCACCATTGCAGAAGGAGCTGTTGGCTGgtcagagttttgactcctccctttgttacttgtgacttgctgtttcatccccctatttgaaaggtggcaacctttttcttcacagtgctctcttttttcttaacaagtatgctcttgttgaacag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT