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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATTGACAAAAAATGGTGGGAAATGCAGGAGCGAGGCAACCAAGTTGCTTCATTACTTGATATTGGACAAGTTGGTCCAAGGGTAACATGTCGTTGTCAGgtcagtacatggtactctgcaatacatttctaagtagtattaaacaccaaagaatgaggatccatggacaacagtttctctggtgcaatttctcttattt...

Basic information

species Zea mays
transcript GRMZM2G066485_T02
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G066485_T01 (Zea mays), 5'ss of exon 11
lower sequence: LOC_Os05g29050.1 (Oryza sativa), 5'ss of exon 11
CATTGACAAAAAATGGTGGGAAATGCAGGAGCGAGGCAACCAAGTTGCTTCATTACTTGATATTGGACAAGTTGGTCCAAGGGTAACATGTCGTTGTCAGgtcagtacatggtactctgcaatacatttctaagtagtat-taaacaccaaagaatgaggatccatggacaacagtttctctg-gtgcaatttctcttattt---------
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CATGGATAAGAACTGGTGGGAGATGCAAGAAAGAGGAGATCAAGTTGCTTCAGTACTTGATATAGGGCAAGTTGGTCCAAGGGCAACTTGTCATTGTCAGgtcagtat---------tgaagttaattttgaattaatttgttgatgccaatgaatgaga--taatgagcaagagtttctcaaagttttggctattttagttatataacta