1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GATGAAATAGAAATCCAAAACGGTGACAGCTACCGATTCCAACAGgtgtgcactatatcatctgcttgtcgtgtttattgtatcctaatactttatttttatcctccttacacttaactggtacttctaacgaaagttcacccag...
species | Zea mays |
transcript | GRMZM2G040945_T01 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: AATAGAAATTCAAAACGGTGACAGCTACCGATTCCAACAG GCAAAATTGAGTATAATACATGATCTACTTGGGAAAGTCCATGCAGCTGTTEST: gi|78103884|gb|DV522307.1|DV522307
genomic: AATAGAAATCCAAAACGGTGACAGCTACCGATTCCAACAGgtgtgcacta ... tgcattgcagGCAAAATTGAGTATAATACATGATCTACTTGGGAAAGTCCATGCAGCTGTT
EST: AATAGAAATCCAAAACGGTGACAGCTACCGATTCCAACAG GCAAAATTGAGTATAATACATGATCTACTTGGGAAAGTCCATGCAGCTGTTEST: gi|211404930|gb|FL464353.1|FL464353
genomic: AATAGAAATCCAAAACGGTGACAGCTACCGATTCCAACAGgtgtgcacta ... tgcattgcagGCAAAATTGAGTATAATACATGATCTACTTGGGAAAGTCCATGCAGCTGTT
EST: GATGAAATAGAAATCCAAAACGGTGACAGCTCCCGATCCCAACAG GCAAAATGGAGTATAATACATGATCTACTTGGGAAAGTCCATGCAGCTGTT
genomic: GATGAAATAGAAATCCAAAACGGTGACAGCTACCGATTCCAACAGgtgtgcacta ... tgcattgcagGCAAAATTGAGTATAATACATGATCTACTTGGGAAAGTCCATGCAGCTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGAAATAGAAATCCAAAACGGTGACAGCTACCGATTCCAACAGgtgtgcactatatcatctgcttgtcgtgtttattgtatcctaatactttatttttatcctccttacacttaactggtacttctaacgaaagttcacccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aacgaaag