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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgcctctgcaatatatgtgacttttcggtttttgacctgtgatttttgttggtgattcag

Basic information

species Zea mays
transcript GRMZM2G026231_T01
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: LOC_Os12g07670.1 (Oryza sativa), 5'ss of exon 11
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaag---ctaatatt-----gtgcctctgcaatatatgtgacttt-tcg-------gtttttgacctgtgatttttgttggtgattcag
|||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    |||| |      || ||| |  |||   ||  ||||| ||        |||||||   ||  || | | |||| |||||||
TACTACTATCATGTAAAGACAAAGATGTCAGGTTTTTTCCAGACGAGTTTCTACTTCGGTTACACATTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagatcttaatttctactagtaccttt-taatccgtgacactttatcattatgatgtttttgttttgacatctgttttggcgattcag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: GLYMA08G20100.1 (Glycine max), 5'ss of exon 11
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgcctctgcaatatatgtgacttttcggttttt------gacctgtgatttttgttggtgattcag---------------------------------------------------------------------------------------------
||||||||| |||||||||| |||||||||||||||||||| || || ||||| ||||| |||||  ||||||| || ||||| || || || || |||||||||     | | |   | |    | | | ||  || |  |||         ||  || |||   |  |  | | |||                                                                                              
TACTACTACTATGTGAAGACGAAGATGTCAGGCTTCTTCCAAACCAGCTTCTATTTTGGATACACTTTGATGTTTTGTCTTGGGCTGGGAATTCTGTGTGgtaagtcttcagtttaattgtaatctctgtttggattgtgtgttcactctgcagaattgggataccttgtccttagtcaattgccaaatacctcttttttatattaatattaatgctagagtagagtgttcttaatcttatcatatggattaaatttttctccaaatgtgcag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: GLYMA12G29120.1 (Glycine max), 5'ss of exon 11
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagct---aat---attgtg-cctctgcaatatatgtgacttttcggtttttgacctgtgatttttgttggtgattcag-----------------------------------------------------------------
||||||||| |||||||||| |||||||||||||||||||| || || ||||| ||||| |||||  ||||||| || ||||| || || || || |||||||||     | |   |||||   |||||||  | ||| ||    |  |||     |     |  ||| ||    ||| |                                                                  
TACTACTACTATGTGAAGACGAAGATGTCAGGCTTCTTCCAAACCAGCTTCTATTTTGGATACACTTTGATGTTTTGTCTTGGACTGGGAATTCTGTGTGgtaagtcttcagtttaattgtaatctctgcagaa-atgggataccttagttaagtgctgaatacctttttttaatatttatattaatgctagagtgttcttaatcttatcacttgaattggattaaatttttctccaaatgtgcag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: GLYMA08G13370.1 (Glycine max), 5'ss of exon 11
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgcctctgca-atatatgtgacttttcggtttttgacctgtgatttttgttggtgattcag---------------------------------------------------------------------------------
||||||| | |||||||||| ||||||||||||||||||||||| || || || ||||| |||||  ||||||| |  ||||| ||||| || || |||||||||      |        |  | || |         ||  ||  ||||  | |  | |    ||   ||| ||                                                                                 
TACTACTTCTATGTGAAGACGAAGATGTCAGGCTTCTTCCAGACCAGCTTTTATTTTGGATACACTTTGATGTTTTCTCTTGGACTAGGAATTCTATGTGgtaagtcgtcttcaatttgatttagattttcaccctgcttatgtgattgaa-tatcttatcgtgtgccaattaagccccacttcttcctattgtcctgcataaagccttgtgtccttatctcctgaatcgggctataatgtttctttaatgtgcag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: GLYMA05G30210.1 (Glycine max), 5'ss of exon 11
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgcctctgcaatatatgtgacttttcggtttttgacctgtgatttt--tgt-tggtgattcag-------------------------------------------------------
||||||| | |||||||||| ||||||||||||||||||||||| || || || ||||| |||||  ||||||| |  ||||| ||||| || || |||||||||      |  |   | ||   || || |      |   | | |||   |  || ||   || || ||||| ||                                                       
TACTACTTCTATGTGAAGACGAAGATGTCAGGCTTCTTCCAGACCAGCTTTTATTTTGGATACACTTTGATGTTTTCTCTTGGACTAGGAATTCTATGTGgtaagtct---tcttcaatttgatttagattttcaccctgcttatgtgattggatatcttatcgtgtgctgattaagccccacttctttctattgtcctgaattgggttataatttatctttaaatgtgcag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: AT1G10950.1 (Arabidopsis thaliana), 5'ss of exon 11
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgc---ctctgcaatatat---gtgacttt-tcggttt---ttgacctgtgatttttgttggtgattcag
|| |||||| | || ||||| |||||||| || |||||||||||||| ||||||||||| |||||  |||||||||| ||||| || || || ||||| ||| |||| |   | | |   |||| |||  ||    |||   || | | |||   |  ||||  | | | ||    |  | |||
TATTACTACTACGTAAAGACCAAGATGTCCGGATTCTTCCAGACAAGCTTCTACTTTGGATACACCATGATGTTCTGTCTTGGCCTTGGAATCCTTTGCGgtgagctcactctcttcactctcttcaaactagcgagtggtgttattgatttgactaaaccttcgttatgtgaaaattttgcag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: Vv12s0035g00280.t01 (Vitis vinifera), 5'ss of exon 11
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgcc------------tctgcaatatatgtgacttttcggtttttgacctgt-gatttttgttggtgattcag-------------
|| |||||| |||||||||| |||||||||||||||||||| || || |||||||| || ||||| |||||||| ||||||||| |||| || || |||||| || |  ||  |||              | |  ||| | |||  ||| |   |     |    | ||||||| |  |  |||                
TATTACTACTATGTGAAGACTAAGATGTCAGGCTTCTTCCAAACCAGCTTCTACTTCGGATACACCCTGATGTTTTGCCTTGGTTTAGGAATCCTCTGTGgtgagtttctacggtgttctgattcctttttttataatttgtgtaccttatttttcacatattcattgatttttatatgaaatttcattttctaaaaaag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: Vv18s0041g00680.t01 (Vitis vinifera), 5'ss of exon 11
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgcctctgcaatatatgtgacttttcggtttttgacctgtgatttttgttggtgattcag--------------------------------------------------------------------------------------------------------
|| |||||  || ||||||| |||||||||||||||||||| || || || || ||||||||||| || ||||| ||||||||| | || ||||| |||||||||     ||| |          | | | | |||| ||  | | |  |      | | | |   |    |                                                                                                          
TATTACTATTATATGAAGACCAAGATGTCAGGCTTCTTCCAAACCAGCTTTTATTTTGGTTACACTCTCATGTTATGCCTTGGTTTGGGGATACTGTGTGgtaagtagccattcttagctcaatttttttttaacttctctctctctctctatctctatctctctatctccctatctatccatctatatatctatctccagccgttcttttagacatccttatctgcaattttcttcgggagcattgatggggttttgttattctcttgatactctag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: PP1S438_29V6.1 (Physcomitrella patens), 5'ss of exon 4
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatat-------tgtgcctctgcaatatatgtgacttttcggtttttgacctgtgatttttgttggtgattcag---------------------------------------------
||||||| | |  ||||||| |||||||| || || |||||||  ||||||||||| || ||||| |||||||||||||| ||  | |||||| | |||||||||      |        |||  |  | |   |  |  | |      | ||||     ||  || ||  || | || ||                                             
TACTACTTCTACATGAAGACGAAGATGTCCGGGTTTTTCCAGATCAGTTTCTACTTCGGGTACACGCTGATGTTCTGCCTGGGGTTGGGCATATTCTGTGgtaagtgggactgggcaggcgtgggtgggtatcctggggtagtgcgtaatatttggttgatgggttgtga-ggcggttgagtggagtggagggtctgacgggtgtgctgtttgtggcggctggcag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: EFJ15096 (Selaginella moellendorffii), 5'ss of exon 12
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgcctctgcaatatatgtgacttttcggtttttgacctgtgatttttgttggtgattcag
|||||||||    ||||||| |||||||| || || ||||| || ||||||||||| || ||||| |||||| ||||| |||| || || |  || |||||| ||   |   |   |  |     | |   ||       || ||   | || ||||  ||  || ||   |||
TACTACTACTTCATGAAGACCAAGATGTCCGGGTTTTTCCAAACGAGTTTCTACTTCGGCTACACTCTGATGCTCTGCGTTGGACTGGGGAGCCTCTGTGgtgagt--accatacactccgattgttttcttggtcggatggattgataactttgatggtt--tgatg-cgcag

upper sequence: GRMZM2G026231_T01 (Zea mays), 5'ss of exon 11
lower sequence: EFJ37593 (Selaginella moellendorffii), 5'ss of exon 12
TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaatattgtgcctctgcaatatatgtgacttttcggtttttgacctgtgatttttgttggtgattcag
|||||||||    ||||||| |||||||| || || ||||| || ||||||||||| || ||||| |||||| ||||| |||| || || |  || |||||| ||   |   |   |  |     | |   ||       || ||     || ||||  || ||| ||   |||
TACTACTACTTCATGAAGACCAAGATGTCCGGGTTTTTCCAAACGAGTTTCTACTTCGGCTACACTCTGATGCTCTGCGTTGGACTGGGGAGCCTCTGTGgtgagt--accatacactccgattgttttcttggtcggatggattgatgactttgatggtt-ttgatg-cgcag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26557670|gb|CA829905.1|CA829905
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|50331622|gb|CO526748.1|CO526748
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|76289399|gb|DV028967.1|DV028967
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|101393230|gb|EB818546.1|EB818546
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|60337753|gb|DN204726.1|DN204726
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|60340578|gb|DN207551.1|DN207551
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|21759969|gb|BQ635510.1|BQ635510
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|50331623|gb|CO526749.1|CO526749
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|101393232|gb|EB818547.1|EB818547
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|86472911|gb|DY239281.1|DY239281
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|24769453|gb|CA404582.1|CA404582
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|6501113|gb|AW202486.1|AW202486
EST:     CTACTTTGGTTACCCCCTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATATAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|76019163|gb|DT946333.1|DT946333
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|76019164|gb|DT946334.1|DT946334
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|76289400|gb|DV028968.1|DV028968
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|31356756|gb|CD441113.1|CD441113
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|24765154|gb|CA400314.1|CA400314
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|60352739|gb|DN219712.1|DN219712
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
EST: gi|12972421|gb|BG267973.1|BG267973
EST:     CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTG                         GTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA
genomic: CTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 48 (upstream exon), 48 (downstream exon)
Score: 414

TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAAATATCAAATGTGATTAAATCCCTGCTACTTACTAGCAGCAGAAAGACCA


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 308

TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAAATATCAAATGTGATTAAATCCCTGCTACTTACTAGCAGCAGAAAGACCA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 246

TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAAATATCAAATGTGATTAAATCCCTGCTACTTACTAGCAGCAGAAAGACCA


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 494

TACTACTACCATGTGAAGACAAAGATGTCAGGCTTCTTCCAGACAAGTTTCTACTTTGGTTACACACTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGgtaagctaat ... ggtgattcagGTGCTATTGGGTATCTAGGGTCAACCCTTTTTGTAAGGAGAATCTACAGAAATATCAAATGTGATTAAATCCCTGCTACTTACTAGCAGCAGAAAGACCA