1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATTGTTGACAGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAGgtgatacctagttcttgtgttcttcctcggcccaaaataagggagacctatttagatctgacacagcaactaagggtgtgtttggttgtgggacagctag...
species | Zea mays |
transcript | GRMZM2G017845_T03 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: AGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAG GATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTGEST: gi|211160711|gb|FL458128.1|FL458128
genomic: AGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAGgtgataccta ... gtcatcacagGATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTG
EST: ATGATGCATGCATGGTTGCGGCTTAAAG GATACCGGACAYTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTGEST: gi|110191747|gb|EC873645.1|EC873645
genomic: ATGATGCATGCATGGTTGCGGCTTAAAGgtgataccta ... gtcatcacagGATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTG
EST: AGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAG GATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTGEST: gi|148946275|gb|EC891576.2|EC891576
genomic: AGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAGgtgataccta ... gtcatcacagGATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTG
EST: AGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAG GATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTGEST: gi|78116577|gb|DV534964.1|DV534964
genomic: AGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAGgtgataccta ... gtcatcacagGATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTG
EST: AGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAG GATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTG
genomic: AGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAGgtgataccta ... gtcatcacagGATACCGGACACTGAGCCCAGACGTAGAAGAGGGCATTTGCCAAGTTCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGTTGACAGGTTCAATTTTAGCTCATGAGATGATGCATGCATGGTTGCGGCTTAAAGgtgatacctagttcttgtgttcttcctcggcccaaaataagggagacctatttagatctgacacagcaactaagggtgtgtttggttgtgggacagctag
- - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - GAGATG