1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGGgtgagtgagtgagtctaccgctattattcagtctgaatccagtaaatcagaattccacaggataatagtacctatatttcctgcaaagacaaattgtacatacatcaaaagcatctcgcatggcatgttttatgtggacacgacaataactccgttcttggatgttaaaactattttgacaatctccag
species | Zea mays |
transcript | GRMZM2G011078_T01 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGG ATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGCEST: gi|71440938|gb|DR821988.1|DR821988
genomic: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGGgtgagtgagt ... caatctccagATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGC
EST: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGG ATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGCEST: gi|24763111|gb|CA398294.1|CA398294
genomic: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGGgtgagtgagt ... caatctccagATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGC
EST: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGG ATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGCEST: gi|76280657|gb|DV020225.1|DV020225
genomic: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGGgtgagtgagt ... caatctccagATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGC
EST: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGG ATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGCEST: gi|89760515|gb|DY688892.1|DY688892
genomic: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGGgtgagtgagt ... caatctccagATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGC
EST: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGG ATCTTTTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGC
genomic: CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGGgtgagtgagt ... caatctccagATCTTCTACTTCATTGGCTTTGCATTGTTCTGCCTGGAGGCTTTGCTAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGGATTTTGCCAGCAATCAGCTTGATAGGCGACAGCGTCATTGTTGGGgtgagtgagtgagtctaccgctattattcagtctgaatccagtaaatcagaattccacaggataatagtacctatatttcctgcaaagacaaattgtacatacatcaaaagcatctcgcatggcatgttttatgtggacacgacaataactccgttcttggatgttaaaactattttgacaatctccag
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