1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GATGAGGAAGACGATAGGGATGATGTTGCAGAAGTAGAAGAGAAAGTGAACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAGgtacagtttacatatgttttctggtcagaaaaaatgcatatctgttagctttcacaaatacagcaaccgattactttgttgttggtctatactatgtcaa...
species | Zea mays |
transcript | GRMZM5G897926_T02 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAG GAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGATTCTEST: gi|211396282|gb|FL435790.1|FL435790
genomic: ACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAGgtacagttta ... tctgctgcagGAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGATTCT
EST: ACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAG GAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGATTCTEST: gi|211396281|gb|FL435789.1|FL435789
genomic: ACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAGgtacagttta ... tctgctgcagGAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGATTCT
EST: ACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAG GAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGATTCTEST: gi|78116992|gb|DV535379.1|DV535379
genomic: ACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAGgtacagttta ... tctgctgcagGAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGATTCT
EST: ACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAG GAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGATTCT
genomic: ACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAGgtacagttta ... tctgctgcagGAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGATTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGAGGAAGACGATAGGGATGATGTTGCAGAAGTAGAAGAGAAAGTGAACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCTGAAAAGCCCAAGgtacagtttacatatgttttctggtcagaaaaaatgcatatctgttagctttcacaaatacagcaaccgattactttgttgttggtctatactatgtcaa
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