1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATGCCGCACGCTGATCTTCGTCGGGGAGAGCTCACAGTTCCACGAGGATGCTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAGgtaatgtgtctgggtgtatatgtgtgatgccatctcctgatagaaacatgtctggaacaaaggcggatgctcagacgagttagttaactgcag
species | Zea mays |
transcript | GRMZM5G813363_T03 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAG GTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTGEST: gi|101387837|gb|EB815933.1|EB815933
genomic: CTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAGgtaatgtgtc ... ttaactgcagGTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTG
EST: CTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAG GTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTGEST: gi|71322270|gb|DR797820.1|DR797820
genomic: CTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAGgtaatgtgtc ... ttaactgcagGTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTG
EST: CTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAG GTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTGEST: gi|88749045|gb|DY533186.1|DY533186
genomic: CTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAGgtaatgtgtc ... ttaactgcagGTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTG
EST: CTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAG GTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTGEST: gi|89250952|gb|DY622738.1|DY622738
genomic: CTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAGgtaatgtgtc ... ttaactgcagGTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTG
EST: AAACTGGACCGCAGATACTGCGCGTTAGTTGAG GTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTG
genomic: AAACTGGACCGCAGATACTGCGCGTTAGTTGAGgtaatgtgtc ... ttaactgcagGTGCAGGACTGTGGCTCCCTTGTGACCGAGGAGCAGCCCCACGCGATGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCCGCACGCTGATCTTCGTCGGGGAGAGCTCACAGTTCCACGAGGATGCTATCCACATGGCCACAAAACTGGACCGCAGATACTGCGCGTTAGTTGAGgtaatgtgtctgggtgtatatgtgtgatgccatctcctgatagaaacatgtctggaacaaaggcggatgctcagacgagttagttaactgcag
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