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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATTCGAGATTGCTGCAAAAGCCTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAATgtaagttcatgctccttataacatttccttactgtgcttctcttttggctgcaacttgcagatgcttctgacctctggtatatatgaccttgctatatga...

Basic information

species Zea mays
transcript GRMZM2G376074_T02
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211008051|gb|FL363351.1|FL363351
EST:     CTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAAT                         AACGATGGTTTAACAATCATCCCAGAGTATGATTGGAAGTT
genomic: CTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAATgtaagttcat ... tcgttttcagAACGATGGTTTAACAATCATCCCAGAGTATGATTGGAAGTT
EST: gi|67022296|gb|CO451045.1|CO451045
EST:     CTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAAT                         AACGATGGTTTAACAATCATCCCAGAGTATGATTGGAAGTTATTCTCTGAG
genomic: CTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAATgtaagttcat ... tcgttttcagAACGATGGTTTAACAATCATCCCAGAGTATGATTGGAAGTTATTCTCTGAG
EST: gi|32931325|gb|CF036137.1|CF036137
EST:     CTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAAT                         AACGATGGTTTAACGATCATCCCAGAGTATGATTGGAAGTTATTCTCTGAG
genomic: CTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAATgtaagttcat ... tcgttttcagAACGATGGTTTAACAATCATCCCAGAGTATGATTGGAAGTTATTCTCTGAG
EST: gi|211061749|gb|FL343242.1|FL343242
EST:     CTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAAT                         AACGATGGTTTAACAATCATCCCAGAGTATGATTGGAAGTTATTCTCTGAG
genomic: CTTTGGATCTTGTTTGTAAGCGCGGAAGCATCACTCAGAAAACATCAAATgtaagttcat ... tcgttttcagAACGATGGTTTAACAATCATCCCAGAGTATGATTGGAAGTTATTCTCTGAG