1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaatacatcaattttccaccctgcttttgtatatcattggctcgctgttttgatttctcaccctttttattttaactttacatttaacttggata...
species | Zea mays |
transcript | GRMZM2G353213_T01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCT AAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCAEST: gi|32803778|gb|CD956014.1|CD956014
genomic: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaata ... ttattaacagAAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCA
EST: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCT AAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCAEST: gi|32800822|gb|CD953058.1|CD953058
genomic: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaata ... ttattaacagAAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCA
EST: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCT AAATAACATGGGCGCAGCTCCTGATCAATGGGATAACCGCATACTTGATCAEST: gi|32803516|gb|CD955752.1|CD955752
genomic: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaata ... ttattaacagAAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCA
EST: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCT AAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCAEST: gi|32803636|gb|CD955872.1|CD955872
genomic: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaata ... ttattaacagAAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCA
EST: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCT AAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGEST: gi|32803661|gb|CD955897.1|CD955897
genomic: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaata ... ttattaacagAAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATG
EST: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCT AAATAACATGGGCGCAACTCCTGATCAATGGGATAGCCGCATGCTTGATCAEST: gi|32803435|gb|CD955671.1|CD955671
genomic: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaata ... ttattaacagAAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCA
EST: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCT AAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCA
genomic: GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaata ... ttattaacagAAATAACATGGGCGCAACTCCTGATCAATGGGATAACCGCATGCTTGATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATGCTgtaagtaatacatcaattttccaccctgcttttgtatatcattggctcgctgttttgatttctcaccctttttattttaactttacatttaacttggata
- ATGCTG
- TGCTGC
- - CTGCAG