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GATCGGACAACACGAGGAATATATGATTTGTGTGAATTCACTAAAAGATTGGATCAGAGCCCGAAAGCTGATACTCGTCAGgcaagtcaacacgtatacctaattcactgcttatgaatttattgtgaacactatcatgttaagcctatgacctgtgagaaatttgaacctcggtcctcct...
species | Zea mays |
transcript | GRMZM2G147587_T01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GTGAATTCACTAAAAGATTGGATCAGAGTCCGAAAGCTGATACTCGTCAG GTTACATCATCAACTTCTCGTCCTGCTATTGAATCCTCAGAGAGAATTGTTEST: gi|71766303|gb|DR964240.1|DR964240
genomic: GTGAATTCACTAAAAGATTGGATCAGAGCCCGAAAGCTGATACTCGTCAGgcaagtcaac ... cggttttcagGTTACATCATCAACTTCTCGTCCTGCTATTGAATCCTCAGAGAGAATTGTT
EST: GTGAATTCACTAAAAGATTGGATCAGAGCCCGAAAGCTGATACTCGTCAG GTTACATCATCAACTTCTCGTCCTGCTATTEST: gi|32931362|gb|CF036174.1|CF036174
genomic: GTGAATTCACTAAAAGATTGGATCAGAGCCCGAAAGCTGATACTCGTCAGgcaagtcaac ... cggttttcagGTTACATCATCAACTTCTCGTCCTGCTATT
EST: GTGAATTCACTAAAAGATTGGATCAGAGTCCGAAAGCTGATACTCGTCAG GTTACATCATCAACTTCTCGTCCTGCTATTGAATCCTCAGAGAGAATTGTTEST: gi|32943634|gb|CF048453.1|CF048453
genomic: GTGAATTCACTAAAAGATTGGATCAGAGCCCGAAAGCTGATACTCGTCAGgcaagtcaac ... cggttttcagGTTACATCATCAACTTCTCGTCCTGCTATTGAATCCTCAGAGAGAATTGTT
EST: GTGAATTCACTAAAAGATTGGATCAGAGTCCGAAAGCTGATACTCGTCAG GTTACATCATCAACTTCTCGTCCTGCTATTGAATCCTCAGAGAGAATTGTTEST: gi|32932373|gb|CF037185.1|CF037185
genomic: GTGAATTCACTAAAAGATTGGATCAGAGCCCGAAAGCTGATACTCGTCAGgcaagtcaac ... cggttttcagGTTACATCATCAACTTCTCGTCCTGCTATTGAATCCTCAGAGAGAATTGTT
EST: GTGAATTCACTAAAAGATTGGATCAGAGTCCGAAAGCTGATACTCGTCAG GTTACATCATCAACTTCTCGTCCTGCTATTGAATCCTCAGAGAGAATTGTT
genomic: GTGAATTCACTAAAAGATTGGATCAGAGCCCGAAAGCTGATACTCGTCAGgcaagtcaac ... cggttttcagGTTACATCATCAACTTCTCGTCCTGCTATTGAATCCTCAGAGAGAATTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCGGACAACACGAGGAATATATGATTTGTGTGAATTCACTAAAAGATTGGATCAGAGCCCGAAAGCTGATACTCGTCAGgcaagtcaacacgtatacctaattcactgcttatgaatttattgtgaacactatcatgttaagcctatgacctgtgagaaatttgaacctcggtcctcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT