1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTTTTGGGTACTCCAACAAGGGAAGAGATCAAGTGCATGAACCCAAACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaatatacaaatagataatttagctctgtatcatcacagtgatgtctagctggaattaactggcatacaaaatggatgcgtgatatgcacaaacg...
species | Zea mays |
transcript | GRMZM2G138676_T03 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAG GTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTTEST: gi|31355062|gb|CD439419.1|CD439419
genomic: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaata ... ttatatccagGTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
EST: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAG GTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTTEST: gi|38229772|gb|CF920085.1|CF920085
genomic: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaata ... ttatatccagGTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
EST: ACTACACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAG GTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTTEST: gi|71322556|gb|DR797955.1|DR797955
genomic: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaata ... ttatatccagGTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
EST: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAG GTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTCGTTAGCAGGTTTEST: gi|71312506|gb|DR792786.1|DR792786
genomic: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaata ... ttatatccagGTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
EST: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAG GTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTTEST: gi|32834795|gb|CD974473.1|CD974473
genomic: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaata ... ttatatccagGTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
EST: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAG GTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTTEST: gi|32928721|gb|CF033533.1|CF033533
genomic: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaata ... ttatatccagGTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
EST: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAG GTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTTEST: gi|76292960|gb|DV032528.1|DV032528
genomic: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaata ... ttatatccagGTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
EST: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAG GTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
genomic: ACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaata ... ttatatccagGTTTTTCAAAGAAGGCTTCCACCTGAAGCAGTGGACCTTGTTAGCAGGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTGGGTACTCCAACAAGGGAAGAGATCAAGTGCATGAACCCAAACTATACGGAGTTCAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGgtaattaatatacaaatagataatttagctctgtatcatcacagtgatgtctagctggaattaactggcatacaaaatggatgcgtgatatgcacaaacg
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