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GAATATTAATTGAAAATATGCGGCGTGAGGGATTTGAGCTTTCAGTTTCACCTCCAAAAGTGATgtgagttgcaatttttcacgtaataacaaactatattatgtctgattgcaaatatagatcgtttaggacattggcatggtctataatatgacacttcaac...
species | Zea mays |
transcript | GRMZM2G128688_T01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AATATGCGGCGTGAGGGATTTGAGCTTTCAGTTTCACCTCCAAAAGTGAT GTATAAAACAGAGCGTGGTGAAAGGTTGGAGCCTATTGAAGAAGTGACTGTEST: gi|211333808|gb|FL249504.1|FL249504
genomic: AATATGCGGCGTGAGGGATTTGAGCTTTCAGTTTCACCTCCAAAAGTGATgtgagttgca ... cttgaaatagGTATAAAACAGAGCGTGGTGAAAGGTTGGAGCCTATTGAAGAAGTGACTGT
EST: AATATGCGGCGTGAGGGATTTGAGCTTTCAGTTTCACCTCCAAAAGTGAT GTATAAAACAGAGCGTGGTGAAMGGTTGGAGCCTATTGAAGAAGEST: gi|211333807|gb|FL249503.1|FL249503
genomic: AATATGCGGCGTGAGGGATTTGAGCTTTCAGTTTCACCTCCAAAAGTGATgtgagttgca ... cttgaaatagGTATAAAACAGAGCGTGGTGAAAGGTTGGAGCCTATTGAAGAAG
EST: AATATGCGGCGTGAGGGATTTGAGCTTTCAGTTTCACCTCCAAAAGTGAT GTATAAAACAGAGCGTGGTGAAAGGTTGGAGCCTATTGAAGAAGTGACTGT
genomic: AATATGCGGCGTGAGGGATTTGAGCTTTCAGTTTCACCTCCAAAAGTGATgtgagttgca ... cttgaaatagGTATAAAACAGAGCGTGGTGAAAGGTTGGAGCCTATTGAAGAAGTGACTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATATTAATTGAAAATATGCGGCGTGAGGGATTTGAGCTTTCAGTTTCACCTCCAAAAGTGATgtgagttgcaatttttcacgtaataacaaactatattatgtctgattgcaaatatagatcgtttaggacattggcatggtctataatatgacacttcaac
- - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aataacaa