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TGATGGGGCGGCTGCATTAGTTTTGGTGAGTGGGCAGAAGGCTCAAGAGCTTGGCCTGCAAGTCCTTGCAAGGATCAGAGGATATGCAGATGCGGCTCAAgtaagctacattaaaaaatatctcacttgagatgagagtatattttgtcttgatatttacattgtgacctaaatgttcaaggatattgggagtttatttt...
species | Zea mays |
transcript | GRMZM2G085474_T02 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ATGGCCTGCAAGTCCCTGCAAGGATCAGAGGATATGCAGATGCGGCTCAA GCTCCGGAACGTTTTACAACCACCCCAGCACNTGCGATACCAAAGGCTATAEST: gi|89106387|gb|DY576604.1|DY576604
genomic: TTGGCCTGCAAGTCCTTGCAAGGATCAGAGGATATGCAGATGCGGCTCAAgtaagctaca ... gtttatacagGCTCCGGAACTTTTTACAACCACCCCAGCACTTGCGATACCAAAGGCTATA
EST: TTGGCCTGCAAGTCCTTGCAAGGATCAGAGGATATGCAGATGCGGCTCAA GCTCCGGAACTTTTTACAACCACCCCAGCACTTGCGATACCAAAGGCTATAEST: gi|6526946|gb|AW216191.1|AW216191
genomic: TTGGCCTGCAAGTCCTTGCAAGGATCAGAGGATATGCAGATGCGGCTCAAgtaagctaca ... gtttatacagGCTCCGGAACTTTTTACAACCACCCCAGCACTTGCGATACCAAAGGCTATA
EST: TTGGCCTGCAAGTCCTTGCAAGGATCAGAGGATATGCAGATGCAGCTCAA GCTCCGGAACTTTTTACAACCACCCCAGCACTTGCGATACCAAAGGCTATA
genomic: TTGGCCTGCAAGTCCTTGCAAGGATCAGAGGATATGCAGATGCGGCTCAAgtaagctaca ... gtttatacagGCTCCGGAACTTTTTACAACCACCCCAGCACTTGCGATACCAAAGGCTATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATGGGGCGGCTGCATTAGTTTTGGTGAGTGGGCAGAAGGCTCAAGAGCTTGGCCTGCAAGTCCTTGCAAGGATCAGAGGATATGCAGATGCGGCTCAAgtaagctacattaaaaaatatctcacttgagatgagagtatattttgtcttgatatttacattgtgacctaaatgttcaaggatattgggagtttatttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG