1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTTGTCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAGgttcgtggaactattgtttatgttcattgttttatattccctcaacattaatatccttttgttactttcatttccag
species | Zea mays |
transcript | GRMZM2G044457_T01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAG TTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAAEST: gi|60346135|gb|DN213108.1|DN213108
genomic: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAGgttcgtggaa ... tcatttccagTTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAA
EST: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAG TTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAAEST: gi|50334990|gb|CO530116.1|CO530116
genomic: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAGgttcgtggaa ... tcatttccagTTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAA
EST: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAG TTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAAEST: gi|211172233|gb|FL456933.1|FL456933
genomic: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAGgttcgtggaa ... tcatttccagTTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAA
EST: CAATATTCATTCGAACCAG TTYTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAAEST: gi|149027083|gb|EE046394.2|EE046394
genomic: CAATATTCATTCGAACCAGgttcgtggaa ... tcatttccagTTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAA
EST: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAG TTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAAEST: gi|211162555|gb|FL361310.1|FL361310
genomic: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAGgttcgtggaa ... tcatttccagTTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAA
EST: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAG TTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAAEST: gi|211541072|gb|FL347103.1|FL347103
genomic: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAGgttcgtggaa ... tcatttccagTTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAA
EST: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAG TTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAA
genomic: TCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAGgttcgtggaa ... tcatttccagTTCTCGGTAACGGAACATTTTAGGGATGGAAATGTTCGTCCGAAACCCCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGTCCCTACAATATACACTGATATAAGAGGACACAATATTCATTCGAACCAGgttcgtggaactattgtttatgttcattgttttatattccctcaacattaatatccttttgttactttcatttccag
- - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - AGAGGA