1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TGCTTTACCACAACCAACACTGGCCCTTAACTCAAAGCCTGTGCTAGATCCTGGTACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAGgtatgctactattaggttttcgtcaatgcattttctgattacaagctgagcaacatacatagccttttcacgtcttggtcgattctcttacggtttttgc...
species | Zea mays |
transcript | GRMZM2G029077_T01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAG GAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCAEST: gi|33098958|gb|CF058918.1|CF058918
genomic: ACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAGgtatgctact ... tcgttgacagGAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCA
EST: ACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAG GAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCAEST: gi|33098605|gb|CF058565.1|CF058565
genomic: ACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAGgtatgctact ... tcgttgacagGAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCA
EST: ACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAG GAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCAEST: gi|211403768|gb|FL312295.1|FL312295
genomic: ACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAGgtatgctact ... tcgttgacagGAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCA
EST: CTGGTACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAG GAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCAEST: gi|30032113|gb|CB833964.1|CB833964
genomic: CTGGTACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAGgtatgctact ... tcgttgacagGAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCA
EST: TCCAGAGGAAATGGGGCCAGCTAGCATTGGCCCTGTCTCAG GAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCAEST: gi|33098939|gb|CF058899.1|CF058899
genomic: TCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAGgtatgctact ... tcgttgacagGAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCA
EST: ACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAG GAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCA
genomic: ACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAGgtatgctact ... tcgttgacagGAATGTTCTTTGAGTCCACAAGGGGCAGTAGCTTTGATGAATCCCCAATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTTTACCACAACCAACACTGGCCCTTAACTCAAAGCCTGTGCTAGATCCTGGTACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCACTGTCTCAGgtatgctactattaggttttcgtcaatgcattttctgattacaagctgagcaacatacatagccttttcacgtcttggtcgattctcttacggtttttgc
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