1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGTATACTTTGGCTGGGCAGGACTTTCAACGCGTGGTATATATAAGATGGTTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttctctcacaccacatgcattccatgcagccattcttctactactacttctactactttgttctaaacgccatccactgtag
species | Zea mays |
transcript | GRMZM2G027115_T01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTA GAGCCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTGEST: gi|211114268|gb|FL244779.1|FL244779
genomic: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttc ... tccactgtagGAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
EST: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTA GAACCTTGGCTGCTTCATGATTTCGGCGAGGACTTCTATGGCGAGGAGGTGEST: gi|76018985|gb|DT946155.1|DT946155
genomic: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttc ... tccactgtagGAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
EST: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTA GAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTGEST: gi|18169104|gb|BM338944.1|BM338944
genomic: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttc ... tccactgtagGAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
EST: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTA GAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTGEST: gi|15499363|gb|BI595876.1|BI595876
genomic: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttc ... tccactgtagGAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
EST: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTA GAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTGEST: gi|18169085|gb|BM338925.1|BM338925
genomic: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttc ... tccactgtagGAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
EST: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTA GAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTGEST: gi|15426986|gb|BI542808.1|BI542808
genomic: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttc ... tccactgtagGAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
EST: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTA GAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTGEST: gi|71447208|gb|DR828258.1|DR828258
genomic: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttc ... tccactgtagGAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
EST: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTA GAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
genomic: TTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttc ... tccactgtagGAACCTTGGCTGCTTCATAATTTCGGCGAGGACTTCTATGGCGAGGAGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTATACTTTGGCTGGGCAGGACTTTCAACGCGTGGTATATATAAGATGGTTATGAGCATTGGCTGGAACCCATATTTCGACAATACCGAGAAGACAGTAgtgggtgttctctcacaccacatgcattccatgcagccattcttctactactacttctactactttgttctaaacgccatccactgtag
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