1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CGCTAGTCCTCTCAGCGACGGCGCGAATGTCGCCAACTACACCGCTCTCATGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAGgtcagtttttacgtacgtactcttcgttccatgcatataggtgtcgcacttcatgtggatagttagatagaacgaaatgcgatgctacaattaactgaag...
species | Zea mays |
transcript | GRMZM2G000842_T01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAG GCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACGEST: gi|88758004|gb|DY542145.1|DY542145
genomic: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAGgtcagttttt ... gcgaacgcagGCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACG
EST: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAG GCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACGEST: gi|91869978|gb|EB400638.1|EB400638
genomic: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAGgtcagttttt ... gcgaacgcagGCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACG
EST: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAG GCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACGEST: gi|71757092|gb|DR955029.1|DR955029
genomic: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAGgtcagttttt ... gcgaacgcagGCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACG
EST: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAG GCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACGEST: gi|88753493|gb|DY537634.1|DY537634
genomic: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAGgtcagttttt ... gcgaacgcagGCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACG
EST: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAG GCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACGEST: gi|74246417|gb|DT654331.1|DT654331
genomic: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAGgtcagttttt ... gcgaacgcagGCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACG
EST: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAG GCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACG
genomic: TGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAGgtcagttttt ... gcgaacgcagGCGGACAGCCTGAGGCAGCAGACCTTGCACCAGATGCGGCGGATCCTGACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCTAGTCCTCTCAGCGACGGCGCGAATGTCGCCAACTACACCGCTCTCATGGCCCTGGCACTTGACAGGCTCGACACCCTCGAGAGCTTTTACCGCCAGgtcagtttttacgtacgtactcttcgttccatgcatataggtgtcgcacttcatgtggatagttagatagaacgaaatgcgatgctacaattaactgaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT