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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATCTCACTGACTGTTCTTTCAAGGGgtgagtaacaattatgtctttcgacatgttaatttgatgtactgagttgactataggttggatcaggatagtggatagctggctgcattcaccagtacca...

Basic information

species Zea mays
transcript GRMZM5G869993_T03
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32825983|gb|CD965661.1|CD965661
EST:     GATCTCACTGACTGTTCTTTCAAGGG                         CTTTGTGTGGGAATTATGTCAATTTTGGCGTATTTGAGCTCTATGGTGACA
genomic: GATCTCACTGACTGTTCTTTCAAGGGgtgagtaaca ... gaacttcaagCTTTGTGTGGGAATTATGTCAATTTTGGCGTATTTGAGCTCTATGGTGACA
EST: gi|32824734|gb|CD964456.1|CD964456
EST:     GATCTCACTGACTGTTCTTTCAAGGG                         CTTTGTGTGGGAATTATGTCAATTTTGGCGTATTTGAGCTCTATGGTGACA
genomic: GATCTCACTGACTGTTCTTTCAAGGGgtgagtaaca ... gaacttcaagCTTTGTGTGGGAATTATGTCAATTTTGGCGTATTTGAGCTCTATGGTGACA
EST: gi|32827550|gb|CD967228.1|CD967228
EST:     GATCTCACTGACTGTTCTTTCAAGGG                         CTTTGTGTGGGAATTATGTCAATTTTGGCGTATTTGAGCTCTATGGTGACA
genomic: GATCTCACTGACTGTTCTTTCAAGGGgtgagtaaca ... gaacttcaagCTTTGTGTGGGAATTATGTCAATTTTGGCGTATTTGAGCTCTATGGTGACA