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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTTGACTAATTCTGTGAACTTTACTCCTGCAGGTTGTTTCCTGTCCTTGTGCACTTGGATTAGCTACACCTACAGCTATCTTAATAGGAACTTCCCTAGgtaactttctataccatctgtttccatccatttgttctgactttcataacatgatggggattagataaacttgtagactctttcatgagcaaatttgggt...

Basic information

species Zea mays
transcript GRMZM5G855347_T03
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM5G855347_T03 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os03g08070.2 (Oryza sativa), 5'ss of exon 10
TTTTGACTAATTCTGTGAACTTTACTCCTGCAGGTTGTTTCCTGTCCTTGTGCACTTGGATTAGCTACACCTACAGCTATCTTAATAGGAACTTCCCTAGgtaactttctataccatc-tgtttccatccatttgttc-tgactttca--taacatgatggggattagataaacttgtagactctttcatgagcaaatttgggt
                                 ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| || |||||||||||||  |||  |||||   | | ||||||| |||  ||    | | |  |||||| |  || |  ||  || | || |  ||  |  ||   ||  
---------------------------------GTTGTTTCCTGTCCTTGTGCACTCGGATTAGCTACCCCTACAGCTATTTTGATAGGAACTTCACTGGgtaactttctatgtcataatgtttgggttcgtttgttcctgatatttggctgatacaatgggg-tcggagatgctcataca-tcataaatacgataaagagg--