1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CCACGAACGGCCGCCGCCGACGAGACGGGGGCGCATGGCGACTGCATCCTCCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAGgtactgtccgcacacccgcattatttagtttctattttttatagcctctcgcgagccgcgcatccgtccgtccgcgaggcagaggcggagccagtggaat...
species | Zea mays |
transcript | GRMZM5G852877_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAG CCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCAGEST: gi|211429951|gb|FL102243.1|FL102243
genomic: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAGgtactgtccg ... ttggacacagCCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCAG
EST: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAG CCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCAGEST: gi|211429949|gb|FL102241.1|FL102241
genomic: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAGgtactgtccg ... ttggacacagCCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCAG
EST: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAG CCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCAGEST: gi|211429950|gb|FL102242.1|FL102242
genomic: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAGgtactgtccg ... ttggacacagCCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCAG
EST: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAG CCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCAGEST: gi|94479085|gb|EB708043.1|EB708043
genomic: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAGgtactgtccg ... ttggacacagCCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCAG
EST: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAG CCCAAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCA
genomic: CCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAGgtactgtccg ... ttggacacagCC-AAAGTGCGGCTCCAGCTGCAAAGGAAGGCACCACTACCGTCGCCACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCACGAACGGCCGCCGCCGACGAGACGGGGGCGCATGGCGACTGCATCCTCCTTCACCGCCATCTTCTTCAGCAGCGCCTTCGCGGCCTGCTTCGCGGAGgtactgtccgcacacccgcattatttagtttctattttttatagcctctcgcgagccgcgcatccgtccgtccgcgaggcagaggcggagccagtggaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cacccgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccgtccgc