Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|93012545|gb|EB638065.1|EB638065EST: TCCCGCCGTCGTGGAGAGGTCACGCGGCTGGTTCCCGCCGCTTCCGGACG CGCACGGTGGTTGTTGCGCTGATTCGTTGTCTTGTGAGCTGTTCTAGGGTT
genomic: TCCCGCCGTCGTGGAGAGGTCACGCGGCTGGTTCCCGCCGCTTCCGGACGgttcggcctt ... gctctcccagCGCACGGTGGTTGTTGCGCTGATTCGTTGTCTTGTGAGCTGTTCTAGGGTT
EST:
gi|211151295|gb|FL136105.1|FL136105EST: TCCCGCCGTCGTGGAGAGGTCACGCGGCTGGTTCCCGCCGCTTCCGGACG CGCACGGTGGTTGTTGCGCTGATTCGTATGTCTTGTGAGCTGTTCTA
genomic: TCCCGCCGTCGTGGAGAGGTCACGCGGCTGGTTCCCGCCGCTTCCGGACGgttcggcctt ... gctctcccagCGCACGGTGGTTGTTGCGCTGATTCGT-TGTCTTGTGAGCTGTTCTA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCCTGTACGGCGTCTCACGCCTCACCCCAACTCGCTCCCTTCCCCGTGCTTCCCGCCGTCGTGGAGAGGTCACGCGGCTGGTTCCCGCCGCTTCCGGACGgttcggccttccagcttccccttgagttcaccacgttttgtgacgcaagctagctgaaccctactgattgctctcccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - -CGCCGTCG