1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTGCGTTCCCGCGCCGCCACCGCCATGGCTGCCGCTGCCCCCCATGCATACTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAGgtgagtccgttcgtcccaccctcgtcgctcgagttagagatttattattatatcaatcggttgtgaaacagataaatctaacgctcacttcgcgatctctactag
species | Zea mays |
transcript | GRMZM5G819212_T05 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAG TTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGACEST: gi|211290851|gb|FL314522.1|FL314522
genomic: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAGgtgagtccgt ... tctctactagTTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGAC
EST: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAG TTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGACEST: gi|33467473|gb|CF244522.1|CF244522
genomic: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAGgtgagtccgt ... tctctactagTTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGAC
EST: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAG TTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGACEST: gi|211269504|gb|FL311290.1|FL311290
genomic: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAGgtgagtccgt ... tctctactagTTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGAC
EST: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAG TTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGACEST: gi|211336107|gb|FL367026.1|FL367026
genomic: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAGgtgagtccgt ... tctctactagTTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGAC
EST: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAG TTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGAC
genomic: CTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAGgtgagtccgt ... tctctactagTTTCTTTCGGTGCTTCGTGCCACAAGTGGAGGAAGGTTCCGGCATGGCGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCGTTCCCGCGCCGCCACCGCCATGGCTGCCGCTGCCCCCCATGCATACTCCTCCCTCGTGCCTGTTTCGGCTGCGCGGCCTCTCTCCGGAAGCACAGgtgagtccgttcgtcccaccctcgtcgctcgagttagagatttattattatatcaatcggttgtgaaacagataaatctaacgctcacttcgcgatctctactag
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