Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|6918669|gb|AW400199.1|AW400199EST: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
EST:
gi|93017174|gb|EB642694.1|EB642694EST: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
EST:
gi|5871687|gb|AW018158.1|AW018158EST: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
EST:
gi|32866729|gb|CF006411.1|CF006411EST: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
EST:
gi|16926010|gb|BM079078.1|BM079078EST: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
EST:
gi|30306816|gb|CD001489.1|CD001489EST: CTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: CTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
EST:
gi|60349623|gb|DN216596.1|DN216596EST: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
EST:
gi|211104574|gb|FL031920.1|FL031920EST: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
EST:
gi|60399105|gb|DN231919.1|DN231919EST: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAG TCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
genomic: GTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctacta ... tgaaatgcagTCGTCAATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGCGCTCTCGATTGATGACATGGCAGGAGGAACATTCACTATCTCCAATGGTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAACCCCCCACAGgtagctactaaacatttatcagttgcaacacatttgtagcatgcagatgtttatattgatctgaaacatgatctatgtgaaatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC