1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCAGCGATCTTCATCGCCCGACCTTCGTCGCAGCCTGATCGTCCTCAAGTCTACTGCTGGTACAGGAGGTGGCAATGCTTCCTCAGGACTGCTGCCCACCgtgagaagacgctttcatattttccttcattaattatgctcttacatgtattactaaaagccatctctttttcgtctgttctagaataattgaactcgatgcgtgtatgcag
species | Zea mays |
transcript | GRMZM2G478212_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTACTGCTGGTACAGGAGGTGGCAATGCTTCCTCAGGACTGCTGCCCACC ATTCTTGGGGTGGCGCATCTGCTTGTGTCGCTGGGCATTGTGCTCGCCACCEST: gi|211213409|gb|FL105881.1|FL105881
genomic: CTACTGCTGGTACAGGAGGTGGCAATGCTTCCTCAGGACTGCTGCCCACCgtgagaagac ... gtgtatgcagATTCTTGGGGTGGCGCATCTGCTTGTGTCGCTGGGCATTGTGCTCGCCACC
EST: CTACTGCTGGTACAGGAGGTGGCAATGCTTCCTCAGGACTGCTGCCCACC ATTCTTGGGGTEST: gi|211213407|gb|FL105879.1|FL105879
genomic: CTACTGCTGGTACAGGAGGTGGCAATGCTTCCTCAGGACTGCTGCCCACCgtgagaagac ... gtgtatgcagATTCTTGGGGT
EST: CTACTGCTGGTACAGGAGGTGGCAATGCTTCCTCAGGACTGCTGCCCACC ATTCTTGGGGTGGCGCATCTGCTTGTGTCGCTGGGCATTGTGCTCGCCACC
genomic: CTACTGCTGGTACAGGAGGTGGCAATGCTTCCTCAGGACTGCTGCCCACCgtgagaagac ... gtgtatgcagATTCTTGGGGTGGCGCATCTGCTTGTGTCGCTGGGCATTGTGCTCGCCACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGCGATCTTCATCGCCCGACCTTCGTCGCAGCCTGATCGTCCTCAAGTCTACTGCTGGTACAGGAGGTGGCAATGCTTCCTCAGGACTGCTGCCCACCgtgagaagacgctttcatattttccttcattaattatgctcttacatgtattactaaaagccatctctttttcgtctgttctagaataattgaactcgatgcgtgtatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC