1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGGTGCCGGTCCTCTCAAGCTCGACGACGTGGACGGCAACGTCTACAGCTGCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAGgtccgtcgtgtcgtgttctctcgctttctttaattgggcgcgtcttccagcacgagcgcacgcgaaattcctaagctaatttcggcgtcgcggcgaatgcgatgacggatgatgggaatcgatgtcttgattttcag
species | Zea mays |
transcript | GRMZM2G468740_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCCTCGCCGTCGCCGACGACATCGTCTCCAAG AGCTTCCATTGCAAGAACGGGAAGGCTTACCTTTTCGATAATGTEST: gi|211490727|gb|FL051563.1|FL051563
genomic: TCCTCGCCGTCGCCGACGACATCGTCTCCAAGgtccgtcgtg ... tgattttcagAGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATGT
EST: GCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAG AGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATTTEST: gi|211490726|gb|FL051562.1|FL051562
genomic: GCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAGgtccgtcgtg ... tgattttcagAGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATGT
EST: GCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAG AGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATTTEST: gi|211490725|gb|FL051561.1|FL051561
genomic: GCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAGgtccgtcgtg ... tgattttcagAGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATGT
EST: CAASS-CTTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAG AGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATGTEST: gi|211490728|gb|FL051564.1|FL051564
genomic: CAAGCGCT-GCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAGgtccgtcgtg ... tgattttcagAGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATGT
EST: GCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAG AGCTTCCATTGCAAGAACGGGAAGGCTTACCTTTTCGATAATGTEST: gi|148941325|gb|EC886232.2|EC886232
genomic: GCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAGgtccgtcgtg ... tgattttcagAGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATGT
EST: GCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAG AGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATGT
genomic: GCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAGgtccgtcgtg ... tgattttcagAGCTTCCATTGCAAGAACGGGAAGGCTTACCTCTTCGATAATGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGTGCCGGTCCTCTCAAGCTCGACGACGTGGACGGCAACGTCTACAGCTGCAAGCGCTGCGGCACACTCCTCGCCGTCGCCGACGACATCGTCTCCAAGgtccgtcgtgtcgtgttctctcgctttctttaattgggcgcgtcttccagcacgagcgcacgcgaaattcctaagctaatttcggcgtcgcggcgaatgcgatgacggatgatgggaatcgatgtcttgattttcag
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