1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAACTTGGATGATGCAACTCTTATCAAAGCATGGCAACAAAGCATTGCTAGAACCAGATTGTTCTTCAAGCTTCTTGAAGAATGTATAACCCATTTTGAGgttagtagtatgaagagtttttagaattccaaaaatattttcggtataagaatagcacttctactgcctatcagagttattattagtactccctccgtcc...
species | Zea mays |
transcript | GRMZM2G462803_T04 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GAACCAGATTGTTCTTCAAGCTTCTTGAAGAATGTATAACCCATTTTGAG CACAACAAAACAGGAGACAGCATGCTACTTGGTGCTAGTTCTCGGAGCCCA
genomic: GAACCAGATTGTTCTTCAAGCTTCTTGAAGAATGTATAACCCATTTTGAGgttagtagta ... ttctctgcagCACAACAAAACAGGAGGCAGCATGCTACTTGGTGCTAGTTCTCGGAGCCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACTTGGATGATGCAACTCTTATCAAAGCATGGCAACAAAGCATTGCTAGAACCAGATTGTTCTTCAAGCTTCTTGAAGAATGTATAACCCATTTTGAGgttagtagtatgaagagtttttagaattccaaaaatattttcggtataagaatagcacttctactgcctatcagagttattattagtactccctccgtcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caaaaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagaatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccctcc