1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGAGGACAACTCAGGTGAGAGCGAGGTGATTAACCCGCCAGAAGAGGCTGGCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAGgtgagctcttgacggcgatgtcttgtaatgttttttgtggctatcttctacctataggtagtaaatgataccatctgcagttgtactgattaccatttcgtttatgatgtgattttag
species | Zea mays |
transcript | GRMZM2G452633_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAG GGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGGAGTEST: gi|71445775|gb|DR826825.1|DR826825
genomic: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAGgtgagctctt ... gtgattttagGGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGGAGT
EST: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAG GGGAATCAAAGCCATGTACCTAAGGCTGTCGAATCTAAGAGTCCAAGGAGTEST: gi|71445776|gb|DR826826.1|DR826826
genomic: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAGgtgagctctt ... gtgattttagGGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGGAGT
EST: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAG GGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGGAGTEST: gi|78089215|gb|DV517591.1|DV517591
genomic: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAGgtgagctctt ... gtgattttagGGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGGAGT
EST: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAG GGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGGAGTEST: gi|211147674|gb|FL417439.1|FL417439
genomic: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAGgtgagctctt ... gtgattttagGGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGGAGT
EST: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAG GGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGG
genomic: GCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAGgtgagctctt ... gtgattttagGGGAATCAAAGCCATGTACCTAAGGCTGTCAAATCTAAGAGTCCAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGGACAACTCAGGTGAGAGCGAGGTGATTAACCCGCCAGAAGAGGCTGGCGGGGAGGCCACCTCGCCCCTGGAAGGCAGGAAGCCTCGCCTTTCCAAGgtgagctcttgacggcgatgtcttgtaatgttttttgtggctatcttctacctataggtagtaaatgataccatctgcagttgtactgattaccatttcgtttatgatgtgattttag
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