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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGAACACGACCGCCGTCTCTACTCCCAGTCCCAGCTGCCAAGGTCTTCGTCGCCTCGTCGGGCTCGGGTCCTTTGCCGGCGACGAGCGCGTGCACACCAGgtatgcctgccccttaccttcgcttccttccgtgcaaaaatgagcacccgcgccacaattgaagctatttggctatctgtcttaggatcggatctgatctagtcacgagtgtttgcagtcgtttttgagtaatatcttccattgtttttcttgtgcccag

Basic information

species Zea mays
transcript GRMZM2G426275_T05
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|89762505|gb|DY690055.1|DY690055
EST:     CGCCTCGTCGGGCTCGGGTCCTTTGCCGGCGACGAGCGCGTGCACACCAG                         AAGAATACAGTGGAAGTGGTATGCGGTTGTAAAACGATTTCGATTATTCCA
genomic: CGCCTCGTCGGGCTCGGGTCCTTTGCCGGCGACGAGCGCGTGCACACCAGgtatgcctgc ... ttgtgcccagAAGAATACAGTGGAAGTGGTATGCGGTTGTAAAACGATTTCGATTATTCCA
EST: gi|89762572|gb|DY690099.1|DY690099
EST:     CGCCTCGTCGGGCTCGGGTCCTTTGCCGGCGACGAGCGCGTGCACACCAG                         AAGAATACAGTGGAAGTGGTATGCGGTTGTAAAACGATTTCGATTATTCCA
genomic: CGCCTCGTCGGGCTCGGGTCCTTTGCCGGCGACGAGCGCGTGCACACCAGgtatgcctgc ... ttgtgcccagAAGAATACAGTGGAAGTGGTATGCGGTTGTAAAACGATTTCGATTATTCCA