1 5' 3' | 2 5' 3' | 3 5' 3' |
GAGTCGTCTAGTGTCAGGTGATCTGAATCTCATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGGttcggttcgtgtgaaatttggaactggaccattatgaaacgtgggcttcactggattgccatcaagtgaattggtttcgcgtaggtgccattatgaacaa...
species | Zea mays |
transcript | GRMZM2G423027_T05 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGTGCTGAGGATCGGCATCCGG TTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGCEST: gi|211400276|gb|FL028896.1|FL028896
genomic: AAGTGCTGAGGATCGGCATCCGGttcggttcgt ... caaatttctcTTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGC
EST: AAGTGCTGAGGATCGGCATCCGG TTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGCEST: gi|211402809|gb|FL028898.1|FL028898
genomic: AAGTGCTGAGGATCGGCATCCGGttcggttcgt ... caaatttctcTTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGC
EST: ATTCCGGTGGCTTCTGCCAAGTGCTGAGGAT-GGCATCCGG TTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGCEST: gi|211322150|gb|FL087640.1|FL087640
genomic: ATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGGttcggttcgt ... caaatttctcTTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGC
EST: ATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGG TTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCEST: gi|211400277|gb|FL028897.1|FL028897
genomic: ATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGGttcggttcgt ... caaatttctcTTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGC
EST: AAGTGCTGAGGATCGGCATCCGG TTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGNGCAGCTGCGCTGCGCEST: gi|211178417|gb|FL087633.1|FL087633
genomic: AAGTGCTGAGGATCGGCATCCGGttcggttcgt ... caaatttctcTTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGC
EST: ATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGG TTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGCEST: gi|211178415|gb|FL087631.1|FL087631
genomic: ATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGGttcggttcgt ... caaatttctcTTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGC
EST: CTGGATCCCATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGG TTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGC
genomic: CTGAATCTCATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGGttcggttcgt ... caaatttctcTTCGGTTCGTCGTCCTCGTCCCCACTCCCCACCTGCGCAGCTGCGCTGCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGTCGTCTAGTGTCAGGTGATCTGAATCTCATTCCGGTGGCTTCTGCCAAGTGCTGAGGATCGGCATCCGGttcggttcgtgtgaaatttggaactggaccattatgaaacgtgggcttcactggattgccatcaagtgaattggtttcgcgtaggtgccattatgaacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT