1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ACAGCAGCAGGCCGGAGGTCTCCTCCTTCTACGCATCCACTGAGTTCCTTCCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAGgtgggtctcgtgattttctttccaccatgcatgaattcgccctccgcgtcgcgtgattgcagcccgctttgcggggagacatgaaaagatgggacctttt...
species | Zea mays |
transcript | GRMZM2G396856_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAG TGTTGCTAGCCCCGCCAGAGTTTTCTTCTCCCCCGCAGTCGAATTGGGCGAEST: gi|211417218|gb|FL339022.1|FL339022
genomic: CCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAGgtgggtctcg ... aatttcgcagTGTTGCTAGCCCCGCCAGAGTTTTCTTCTCCCCCGCAGTCGAATTGGGCGA
EST: CCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAG TGTTGCTAGCCCCGCCAGAGTTTTCTTCTCCCCCGCAGTCGAATTGGGCGAEST: gi|211284781|gb|FL315063.1|FL315063
genomic: CCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAGgtgggtctcg ... aatttcgcagTGTTGCTAGCCCCGCCAGAGTTTTCTTCTCCCCCGCAGTCGAATTGGGCGA
EST: CCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAG TGTTGCTAGCCCCGCCAGAGTTTTCTTCTCCCCCGCAGTCGAATTGGGCGAEST: gi|211287518|gb|FL360428.1|FL360428
genomic: CCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAGgtgggtctcg ... aatttcgcagTGTTGCTAGCCCCGCCAGAGTTTTCTTCTCCCCCGCAGTCGAATTGGGCGA
EST: CCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAG TGTTGCTAGCCCCGCCAGAGTTTTCTTCTCCCCCGCAGTCGAATTGGGCGA
genomic: CCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAGgtgggtctcg ... aatttcgcagTGTTGCTAGCCCCGCCAGAGTTTTCTTCTCCCCCGCAGTCGAATTGGGCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGCAGCAGGCCGGAGGTCTCCTCCTTCTACGCATCCACTGAGTTCCTTCCTGCGCAAAGTAAATCCCCAGTTCTTTCGGCCGCTGCCAAGTTTTCGAGgtgggtctcgtgattttctttccaccatgcatgaattcgccctccgcgtcgcgtgattgcagcccgctttgcggggagacatgaaaagatgggacctttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctccgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaagat