Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211339802|gb|FK980818.1|FK980818EST: CGCCATCGCGNAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGG ACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
genomic: CGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGGgtgagtgagc ... atctgatcagACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
EST:
gi|211481726|gb|FL266360.1|FL266360EST: CGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGG ACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
genomic: CGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGGgtgagtgagc ... atctgatcagACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
EST:
gi|211342186|gb|FK980823.1|FK980823EST: CGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGG ACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
genomic: CGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGGgtgagtgagc ... atctgatcagACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
EST:
gi|211342185|gb|FK980822.1|FK980822EST: CGCCATCGCGGAGATCGACCTGAACAAKTGCGAGCCATGGGAGCTCCCGG ACAAGGCGAARATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
genomic: CGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGGgtgagtgagc ... atctgatcagACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
EST:
gi|211339803|gb|FK980819.1|FK980819EST: CGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGG ACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
genomic: CGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGGgtgagtgagc ... atctgatcagACAAGGCGAAGATGGGGGAGAAGGAGTGGTACTTCTACAGCCTCCGCGACC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATCACCTACTACCTCCTCCGCAAGGCCGTGGACGGCAGCTTCTGCGGCCGCGCCATCGCGGAGATCGACCTGAACAAGTGCGAGCCATGGGAGCTCCCGGgtgagtgagctgctttgcttgcatcgaccacccaccgattgaatagacattaagcttgtcgtgatgtgatgtgatctgatctgatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT