1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTGGCTCGCGGAGTATCCGCACCAGGGGGCCGACAAGCGGCCGCGCAAACGGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGgtatggttctggccccgctcgccgcatcgattggctaccagtcgtggggtttggctagatctgggcgcggttttcgctagatttggagtcggttggttcg...
species | Zea mays |
transcript | GRMZM2G386991_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAG GCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACGEST: gi|31664258|gb|CD572983.1|CD572983
genomic: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGgtatggttct ... atttttgtagGCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACG
EST: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAG GCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACGEST: gi|211050915|gb|FL038257.1|FL038257
genomic: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGgtatggttct ... atttttgtagGCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACG
EST: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAG GCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATEST: gi|149089547|gb|EE178794.2|EE178794
genomic: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGgtatggttct ... atttttgtagGCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAAT
EST: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAG GCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACGEST: gi|211529868|gb|FL149407.1|FL149407
genomic: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGgtatggttct ... atttttgtagGCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACG
EST: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAG GCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACG
genomic: GGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGgtatggttct ... atttttgtagGCAATTCCGATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGCTCGCGGAGTATCCGCACCAGGGGGCCGACAAGCGGCCGCGCAAACGGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGgtatggttctggccccgctcgccgcatcgattggctaccagtcgtggggtttggctagatctgggcgcggttttcgctagatttggagtcggttggttcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gccccgc