Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|33285606|gb|CF075401.1|CF075401EST: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG GAATTTGCAACCATGCATTCCACTTCCACTGTATCAGCCGTTGGCTAAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtatgattca ... tattcttcagGAATTTGCAACCATGCATTCCACTTCCACTGTATCAGCCGTTGGCTAAAGA
EST:
gi|211305108|gb|FL162113.1|FL162113EST: GCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG GAATTTGCAACCATGCATTCCACTTCCACTGTATCAGCCGTTGGCTAAAGA
genomic: GCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtatgattca ... tattcttcagGAATTTGCAACCATGCATTCCACTTCCACTGTATCAGCCGTTGGCTAAAGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCTCGCTTGTTGTGGCGGTCCGCGTCTGTCTGTTGTGTAGGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtatgattcatatctactttctttgtttgccccccatccccgtatcgaatgcagggtttgctctgtgtaaacccaacgttcttttattgtgcggtggctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG