1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CCGCCGTCTTCGGCGTCCATCAGCGGTGCCGCGAGGAAAGGGCCGATGAGGCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggataagccttcctcttctgatgccttttcgcttcctgattgcgcgctgctcagcttcactaggcgttgaacaggaccatgcctcctctgaatt...
species | Zea mays |
transcript | GRMZM2G353213_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTGEST: gi|211025073|gb|FL063421.1|FL063421
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTGEST: gi|211025075|gb|FL063423.1|FL063423
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTGEST: gi|71775481|gb|DR973359.1|DR973359
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTGEST: gi|91055447|gb|EB165865.1|EB165865
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTGEST: gi|211025064|gb|FL063412.1|FL063412
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTGEST: gi|148945681|gb|EC890953.2|EC890953
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTGEST: gi|71448507|gb|DR829557.1|DR829557
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTGEST: gi|211025068|gb|FL063416.1|FL063416
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
EST: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACG TTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
genomic: GCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggat ... attacatcagTTTTCGAGGGATTGAGAGCAAAAGGCTTTGCAAGCATGTCATCTTCGACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGCCGTCTTCGGCGTCCATCAGCGGTGCCGCGAGGAAAGGGCCGATGAGGCCCAGGCTCTTCGTTGCCGCGGCGGCGGCTCCTCGCGGCTCCGGAAACGgtgaggggataagccttcctcttctgatgccttttcgcttcctgattgcgcgctgctcagcttcactaggcgttgaacaggaccatgcctcctctgaatt
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