1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTTTGTACCTTACTAGTTCATCCAAgtaagtatacaacaacaacaaaaccttttaatcccaagcaagttggggtacgctagagttggaacccaacaaaagttgcatgttaaggtttagcacatat...
species | Zea mays |
transcript | GRMZM2G314233_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCTTACTAGTTCATCCAA ATTTCTCCCTGCCCCTGATGATAGTTTAGCACTTGACATAGCGTATACCATEST: gi|32844567|gb|CD984248.1|CD984248
genomic: ACCTTACTAGTTCATCCAAgtaagtatac ... aaacttgcagATTTCTCCCTGCCCCTGATGATAGTTTAGCACTTGACATAGCGTATACCAT
EST: TACCTTACTAGGTCATCCAA ATTTCTCCCTGCCCCTGATGATAGTTTAGCACTTGACATAGCGTATACCATEST: gi|87151923|gb|DY396712.1|DY396712
genomic: TACCTTACTAGTTCATCCAAgtaagtatac ... aaacttgcagATTTCTCCCTGCCCCTGATGATAGTTTAGCACTTGACATAGCGTATACCAT
EST: GTTTGTACCTTACTAGTTCATCCAA ATTTCTCCCTGCCCCTGATGATAGTTTAGCACTTGACATAGCGTATACCAT
genomic: GTTTGTACCTTACTAGTTCATCCAAgtaagtatac ... aaacttgcagATTTCTCCCTGCCCCTGATGATAGTTTAGCACTTGACATAGCGTATACCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGTACCTTACTAGTTCATCCAAgtaagtatacaacaacaacaaaaccttttaatcccaagcaagttggggtacgctagagttggaacccaacaaaagttgcatgttaaggtttagcacatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacaacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caacaaaa