1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTCTCTTAGACTTGGCTGCTGGGGCGGCGCTATCCATGGCGAAGTGGGCGTCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAGgtacgagccattctcctccctgggtccttgacctgaaagttactagatagcaagcctttactccttgagtcatgattcgtcaggatccctaatctcccct...
species | Zea mays |
transcript | GRMZM2G300651_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGCTACGACGACGACAGACCGACTTGACGCTCTCAACAG AGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATACEST: gi|78113498|gb|DV531889.1|DV531889
genomic: GGCTACGACGACGACAGACCGACTTGACGCTCTCAACAGgtacgagcca ... gcactgacagAGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATAC
EST: TCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAG AGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATACEST: gi|50331720|gb|CO526846.1|CO526846
genomic: TCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAGgtacgagcca ... gcactgacagAGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATAC
EST: TCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAG AGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATACEST: gi|78104008|gb|DV522426.1|DV522426
genomic: TCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAGgtacgagcca ... gcactgacagAGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATAC
EST: TCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAG AGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATACEST: gi|71326679|gb|DR799997.1|DR799997
genomic: TCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAGgtacgagcca ... gcactgacagAGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATAC
EST: TCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAG AGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATAC
genomic: TCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAGgtacgagcca ... gcactgacagAGCTGCCTTGCCATGAGATACGAGGCACTGTTGCTTAGAGATGCTAAATAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCTCTTAGACTTGGCTGCTGGGGCGGCGCTATCCATGGCGAAGTGGGCGTCGGCCGCGAGGGCTACGACGACGACAGACCGACTTGACGCTCTCAACAGgtacgagccattctcctccctgggtccttgacctgaaagttactagatagcaagcctttactccttgagtcatgattcgtcaggatccctaatctcccct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcctccc