1 5' 3' | 2 5' 3' | 3 5' 3' |
GACAGCGTAACAAAAACCCCGGGCTATCCTCTTCGCTGTCTGCTCTCCTTCACGCTACTGAGCGCGGCTCTGCCAAACTGCAGGGATCCATCGTCCCGCGgtaagcaaactgcatggcatgcagttggggtagcacaagaagctgctgctgtgctttctgtgtgcgtactgcgtgcgtagtatatatggtctggtagatcgatctgctgatctggtgttggtacttggaaaag
species | Zea mays |
transcript | GRMZM2G179885_T04 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACGCTACTAGAGCGCGGCTCTGCCAAACTGCAGGGATCCATCGTCCCGCG GGGCCGGCCAGCCGGGGTAGTACTACGGTGATGAGGTCCATGGAGAGCACGEST: gi|71441634|gb|DR822684.1|DR822684
genomic: ACGCTACT-GAGCGCGGCTCTGCCAAACTGCAGGGATCCATCGTCCCGCGgtaagcaaac ... cttggaaaagGGGCCGGCCAGCCGGGGTAGTACTACGGTGATGAGGTCCATGGAGAGCACG
EST: ACGCTACTAGAGCGCGGCTCTGCCAAACTGCAGGGATCCATCGTCCCGCG GGGCCGGCCAGCCGGGGTAGTACTACGGTGATGAGGTCCATGGAGAGCACGEST: gi|149099136|gb|EE185159.2|EE185159
genomic: ACGCTACT-GAGCGCGGCTCTGCCAAACTGCAGGGATCCATCGTCCCGCGgtaagcaaac ... cttggaaaagGGGCCGGCCAGCCGGGGTAGTACTACGGTGATGAGGTCCATGGAGAGCACG
EST: CATCGTCCCGCG GGGCCGGCCAGCCGGGGTAGTACTACGGTGATGAGGTCCATGGAGAGCACGEST: gi|88757591|gb|DY541732.1|DY541732
genomic: CATCGTCCCGCGgtaagcaaac ... cttggaaaagGGGCCGGCCAGCCGGGGTAGTACTACGGTGATGAGGTCCATGGAGAGCACG
EST: ACGCTACTAGAGCGCGGCTCTGCCAAACTGCAGGGATCCATCGTCCCGCG GGGCCGGCCAGCCGGGGTAGTACTACGGTGATGAGGTCCATGGAGAGCACG
genomic: ACGCTACT-GAGCGCGGCTCTGCCAAACTGCAGGGATCCATCGTCCCGCGgtaagcaaac ... cttggaaaagGGGCCGGCCAGCCGGGGTAGTACTACGGTGATGAGGTCCATGGAGAGCACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACAGCGTAACAAAAACCCCGGGCTATCCTCTTCGCTGTCTGCTCTCCTTCACGCTACTGAGCGCGGCTCTGCCAAACTGCAGGGATCCATCGTCCCGCGgtaagcaaactgcatggcatgcagttggggtagcacaagaagctgctgctgtgctttctgtgtgcgtactgcgtgcgtagtatatatggtctggtagatcgatctgctgatctggtgttggtacttggaaaag
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