1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCAGCAGCCATCACAGCCGCCGCCAGCGACCTCGCAGGGTGCAGTATTCAATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGgtacatagcttcgccctgcaaatgctctgcttcaaacaaaactccattataaaatcgtcaagcatcatgcattctttgagccagaaatctcaaattgcaa...
species | Zea mays |
transcript | GRMZM2G179696_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTTEST: gi|148957360|gb|EC903409.2|EC903409
genomic: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGgtacatagct ... ttgcatacagGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTT
EST: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTTEST: gi|87157047|gb|DY401836.1|DY401836
genomic: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGgtacatagct ... ttgcatacagGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTT
EST: CGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGACTGCTGCCTGCAAAAAGGGGGCATGTACAGTTEST: gi|87156563|gb|DY401352.1|DY401352
genomic: CGGAGTTACAGACGATACTAAGgtacatagct ... ttgcatacagGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTT
EST: CGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGACTGCTGCCTGCAAAAAGGGGGCATGTACAGTTEST: gi|148980217|gb|EE027018.2|EE027018
genomic: CGGAGTTACAGACGATACTAAGgtacatagct ... ttgcatacagGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTT
EST: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTTEST: gi|211155014|gb|FL170448.1|FL170448
genomic: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGgtacatagct ... ttgcatacagGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTT
EST: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGEST: gi|26560071|gb|CA832306.1|CA832306
genomic: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGgtacatagct ... ttgcatacagGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGG
EST: CGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGACTGCTGCCTGCAAAAAGGGGGCATGTACAGTTEST: gi|148941522|gb|EC886453.2|EC886453
genomic: CGGAGTTACAGACGATACTAAGgtacatagct ... ttgcatacagGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTT
EST: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAG GCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTT
genomic: ATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGgtacatagct ... ttgcatacagGCTTTTGAAGGAGCGTGGGCTGCTGCCTGCAAAAAGGGGGCATGTACAGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAGCAGCCATCACAGCCGCCGCCAGCGACCTCGCAGGGTGCAGTATTCAATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGgtacatagcttcgccctgcaaatgctctgcttcaaacaaaactccattataaaatcgtcaagcatcatgcattctttgagccagaaatctcaaattgcaa
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