1 5' 3' | 2 5' 3' | 3 5' 3' |
ATTCGCCGCTGCGTCAACGTGTCTTCCTTCCCGCGGTCTCTCCGCCGCCTCCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAGgtgagatctcgcctcctccccgcgcgctcccttcttgcttgactgctcgaggtccgagtcgccgggacggcccggtgacccccgcggaggttcagtacct...
species | Zea mays |
transcript | GRMZM2G175676_T06 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAG GTAACTTGGGATGAACAAGGTTCCTGGAGAGGGTTCTGTATGAAATTCTTAEST: gi|211020294|gb|FL072144.1|FL072144
genomic: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAGgtgagatctc ... tcttaaatagGTAACTTGG-ATGA-CAAGGTTCCTG-AGAGGGTTCTGTATGAAATTCTTA
EST: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAG GTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCEST: gi|211020297|gb|FL072147.1|FL072147
genomic: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAGgtgagatctc ... tcttaaatagGTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTC
EST: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAG GTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCEST: gi|211439607|gb|FL298838.1|FL298838
genomic: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAGgtgagatctc ... tcttaaatagGTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTC
EST: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAG GTAACTTGGATGACAAGGEST: gi|211020291|gb|FL072141.1|FL072141
genomic: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAGgtgagatctc ... tcttaaatagGTAACTTGGATGACAAGG
EST: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAG GTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCEST: gi|211020292|gb|FL072142.1|FL072142
genomic: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAGgtgagatctc ... tcttaaatagGTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTC
EST: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAG GTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTC
genomic: CCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAGgtgagatctc ... tcttaaatagGTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCGCCGCTGCGTCAACGTGTCTTCCTTCCCGCGGTCTCTCCGCCGCCTCCCAGATCCGGCGGCCATGGCAAGGAACCCGGGCTGCACCGTCTTCATAGgtgagatctcgcctcctccccgcgcgctcccttcttgcttgactgctcgaggtccgagtcgccgggacggcccggtgacccccgcggaggttcagtacct
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