Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|37383200|gb|CF628591.1|CF628591EST: GAGCAGCTCGTGCAGATTTGCGAAGAGGTTGGCCCAGTCGTATCCTTCAG GTTGGTGATTGACAAAGAGACTGGCAAGCCAAAAGGTTATGGCTTTTGCGA
genomic: GAGCAGCTCGTGCAGATTTGCGAAGAGGTTGGCCCAGTCGTATCCTTCAGgtgcgcttct ... ttgcttgcagGTTGGTGATTGACAAAGAGACTGGCAAGCCAAAAGGTTATGGCTTTTGCGA
EST:
gi|71596191|gb|DR906942.1|DR906942EST: GAGCAGCTCGTGCAGATTTGCGAAGAGGTTGGCCCAGTCGTATCCTTCAG GTTGGTGATTGACAAAGAGACTGGCAAGCCAAAAGGTTATGGCTTTTGCGA
genomic: GAGCAGCTCGTGCAGATTTGCGAAGAGGTTGGCCCAGTCGTATCCTTCAGgtgcgcttct ... ttgcttgcagGTTGGTGATTGACAAAGAGACTGGCAAGCCAAAAGGTTATGGCTTTTGCGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATTTATCAATCTCAATTACAGTTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCGAAGAGGTTGGCCCAGTCGTATCCTTCAGgtgcgcttctgctcacccacataaaaactgtaacactgtcgtgcagctctagatgggttgtagaaactagcacttactgtcaaaatgtgtgtttttgcct
- - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG