1 5' 3' | 2 5' 3' | 3 5' 3' |
TCTCACGGCGGAAGCAGCCAAGCAGCCGGCCGGGCGCCTCCCGTGCCGCCGCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCGgtacgccttcgccaccctcggttacgttccctgaccggcgtgatccggaagctcggaggctttggttccacttggaggggccgaggggggaggagagcca...
species | Zea mays |
transcript | GRMZM2G174919_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCG TTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCGEST: gi|211231934|gb|FL170974.1|FL170974
genomic: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCGgtacgccttc ... tcaattacagTTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCG
EST: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCG TTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCGEST: gi|161589532|gb|EY957879.1|EY957879
genomic: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCGgtacgccttc ... tcaattacagTTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCG
EST: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCG TTGGCAACATACCATACGATGEST: gi|211229883|gb|FL170972.1|FL170972
genomic: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCGgtacgccttc ... tcaattacagTTGGCAACATACCATACGATG
EST: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCG TTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCGEST: gi|31360834|gb|CD445191.1|CD445191
genomic: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCGgtacgccttc ... tcaattacagTTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCG
EST: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCG TTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCGEST: gi|16916231|gb|BM072752.1|BM072752
genomic: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCGgtacgccttc ... tcaattacagTTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCG
EST: GTTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCG TTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCG
genomic: GCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCGgtacgccttc ... tcaattacagTTGGCAACATACCATACGATGCGACAGAGGAGCAGCTCGTGCAGATTTGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTCACGGCGGAAGCAGCCAAGCAGCCGGCCGGGCGCCTCCCGTGCCGCCGCTGAGCATGGCCGCTGCTCCCGTGGGCGCTCAGAATCGCTGCGTCTTCGgtacgccttcgccaccctcggttacgttccctgaccggcgtgatccggaagctcggaggctttggttccacttggaggggccgaggggggaggagagcca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cgccacc