1 5' 3' | 2 5' 3' | 3 5' 3' |
GTCGTGCCCGTGCTTGTAAAGGACGATGGCAAGGCGAACGCGAGCGACTACGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAAgtaagcttcctctttgtactgaatacctattattaaaaaaaatttaccggatgtcacctgatactccagcaggaaattaaaccgaccagtatagccatat...
species | Zea mays |
transcript | GRMZM2G171807_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAA GAGGAAACAGCAACAAAAATAGGATACTCGGAATTGEST: gi|78075743|gb|DV504177.1|DV504177
genomic: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAAgtaagcttcc ... tcttatgcagGAGGAAACAGCAACAAAAATAGGATACTCGGAATTG
EST: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAA GAGGAAACAGCAAACAAAA-TAGGATACTCGGAATTGEST: gi|31611801|gb|CD568423.1|CD568423
genomic: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAAgtaagcttcc ... tcttatgcagGAGGAAACAGCAA-CAAAAATAGGATACTCGGAATTG
EST: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAA GAGGAAACAGCAACAAAAAEST: gi|149028989|gb|EE286173.2|EE286173
genomic: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAAgtaagcttcc ... tcttatgcagGAGGAAACAGCAACAAAAA
EST: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAA GAGGAAACAGCAACAAAAATEST: gi|78104925|gb|DV523343.1|DV523343
genomic: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAAgtaagcttcc ... tcttatgcagGAGGAAACAGCAACAAAAAT
EST: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAA GAGGAAACAGCAACAAAAATAGGATACTCGGAATTG
genomic: CGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAAgtaagcttcc ... tcttatgcagGAGGAAACAGCAACAAAAATAGGATACTCGGAATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCGTGCCCGTGCTTGTAAAGGACGATGGCAAGGCGAACGCGAGCGACTACGAGCAACTCATAAGTGGCGGCTTCCTCTTGACATGGCAGTGGCAGACAAgtaagcttcctctttgtactgaatacctattattaaaaaaaatttaccggatgtcacctgatactccagcaggaaattaaaccgaccagtatagccatat
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