Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGAAACCTCTGCCCCGGGGCTAGGGTTTCCTCCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacccactgccgccgctctcgtttcaccccatttcgtccggccgtctaattcgttggccggcccgttctgttcgtggaagcgctcggatctgct...

Basic information

species Zea mays
transcript GRMZM2G166659_T01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|91871654|gb|EB401611.1|EB401611
EST:     CGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211498422|gb|FL241117.1|FL241117
EST:     ACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: ACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211135420|gb|FL241165.1|FL241165
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|60337379|gb|DN204352.1|DN204352
EST:     CGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|28361848|gb|CB240204.1|CB240204
EST:     GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|32909400|gb|CF014212.1|CF014212
EST:     CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|30704497|gb|CD058540.1|CD058540
EST:     GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133537|gb|FL241139.1|FL241139
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211133529|gb|FL241131.1|FL241131
EST:     CCCTGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|9566464|gb|BE475973.1|BE475973
EST:     TTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: TTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|213175291|gb|FM183554.1|FM183554
EST:     GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|9254249|gb|BE344717.1|BE344717
EST:     ACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: ACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211134469|gb|FL241143.1|FL241143
EST:     CAGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211495536|gb|FL241105.1|FL241105
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211135424|gb|FL241169.1|FL241169
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|32909399|gb|CF014211.1|CF014211
EST:     CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|60352021|gb|DN218994.1|DN218994
EST:     GTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|84980252|gb|DW530601.1|DW530601
EST:     CCAGCCGTCATCGCTTC-CGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|60357901|gb|DN224874.1|DN224874
EST:     TTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: TTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211135421|gb|FL241166.1|FL241166
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211135412|gb|FL241157.1|FL241157
EST:     ACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: ACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|6020325|gb|AW065253.1|AW065253
EST:     GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133525|gb|FL241127.1|FL241127
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAAGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211136353|gb|FL241171.1|FL241171
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|76288031|gb|DV027599.1|DV027599
EST:     CGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133526|gb|FL241128.1|FL241128
EST:     GCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGAAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|13237311|gb|BG355325.1|BG355325
EST:     CCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211134475|gb|FL241149.1|FL241149
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|26557771|gb|CA830006.1|CA830006
EST:     ACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: ACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|28361660|gb|CB240016.1|CB240016
EST:     AGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133524|gb|FL241126.1|FL241126
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211498421|gb|FL241116.1|FL241116
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|60356313|gb|DN223286.1|DN223286
EST:     -CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211498417|gb|FL241112.1|FL241112
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211135419|gb|FL241164.1|FL241164
EST:     ACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: ACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211498419|gb|FL241114.1|FL241114
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133528|gb|FL241130.1|FL241130
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211135422|gb|FL241167.1|FL241167
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211134467|gb|FL241141.1|FL241141
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211134470|gb|FL241144.1|FL241144
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211135417|gb|FL241162.1|FL241162
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|84981002|gb|DW531351.1|DW531351
EST:     GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211498423|gb|FL241118.1|FL241118
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211135411|gb|FL241156.1|FL241156
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211498420|gb|FL241115.1|FL241115
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCYCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211135413|gb|FL241158.1|FL241158
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGTCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133533|gb|FL241135.1|FL241135
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211135415|gb|FL241160.1|FL241160
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|60341795|gb|DN208768.1|DN208768
EST:     GTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133527|gb|FL241129.1|FL241129
EST:     CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGTAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211498418|gb|FL241113.1|FL241113
EST:     AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133532|gb|FL241134.1|FL241134
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211498424|gb|FL241119.1|FL241119
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211134478|gb|FL241152.1|FL241152
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|84980937|gb|DW531286.1|DW531286
EST:     CCC-GCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133531|gb|FL241133.1|FL241133
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211133538|gb|FL241140.1|FL241140
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGTTGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211498427|gb|FL241122.1|FL241122
EST:     CAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211135418|gb|FL241163.1|FL241163
EST:     CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|94475909|gb|EB704867.1|EB704867
EST:     TCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: TCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|211498425|gb|FL241120.1|FL241120
EST:     CCCAGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: CCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211134477|gb|FL241151.1|FL241151
EST:     AGCCGTCATCGCTTCACGTCCGCTACATACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: AGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|211133534|gb|FL241136.1|FL241136
EST:     ACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCAT-AAATGGCTCCTAAAG
genomic: ACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGC-TCAAATGGCTCCTAAAG
EST: gi|84980986|gb|DW531335.1|DW531335
EST:     GTCCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: GTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
EST: gi|9733137|gb|BE511889.1|BE511889
EST:     CCGCTACAGACCGGCGAGGAGACGAAAG                         GAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG
genomic: CCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacc ... tgcaattcagGAGGGAGTTTTGAGAAGCTCAAATGGCTCCTAAAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATGAAACCTCTGCCCCGGGGCTAGGGTTTCCTCCCAGCCGTCATCGCTTCACGTCCGCTACAGACCGGCGAGGAGACGAAAGgtaagccacccactgccgccgctctcgtttcaccccatttcgtccggccgtctaattcgttggccggcccgttctgttcgtggaagcgctcggatctgct

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA