Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18384588|gb|BM417787.1|BM417787EST: GGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAG GCGATGGCCAACTTCATGGAGAA
genomic: GGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAGgtgcgtggtg ... ttgcttgcagGCGATGGCCAACTTCATGGAGAA
EST:
gi|149098178|gb|EE184141.2|EE184141EST: GGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAG GCGATGGCCAACTTCATGGAGAAGGTTAGGGGCGGCAAGGCCCGGTTTGAC
genomic: GGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAGgtgcgtggtg ... ttgcttgcagGCGATGGCCAACTTCATGGAGAAGGTTAGGGGCGGCAAGGCCCGGTTTGAC
EST:
gi|148948786|gb|EC894187.2|EC894187EST: GGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAG GCGATGGCCAACTTCATGGAGAAGGTTAGGGGCGGCAAGGCCCGGTTTGAC
genomic: GGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAGgtgcgtggtg ... ttgcttgcagGCGATGGCCAACTTCATGGAGAAGGTTAGGGGCGGCAAGGCCCGGTTTGAC
EST:
gi|18384667|gb|BM417866.1|BM417866EST: GGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAG GCGATGGCCAACTTCATGGAGA
genomic: GGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAGgtgcgtggtg ... ttgcttgcagGCGATGGCCAACTTCATGGAGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCCGGAGGCCGCGGGCTGGGGCGGCTCCGGCTCCGGCGTCGCCAGCTTCAGGGACAACGCGCTGTTCCAGGACTACCACGGCCTCAAGGCCTTCAGAAAGgtgcgtggtgaccccgagcgcctgctctgctcgtcttgttcggtgtcctggatagaccctgcctggacaagtgcaacgtactgacggcgtcattttgcttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT