Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|44900209|gb|CK826754.1|CK826754EST: CTGAACTGGAGCGCTGCAG GTTCATTTGCCTCCTACATGACGGTGAGTGCTTTGACTCTCGTCTTCGTCA
genomic: CTGAACTGGAGCGCTGCAGgtccatctat ... aatcgtgcagGTACATTTGCCTCCTACATGATGGTGAGTGCTTTCACTCTCGTCTTCGTCA
EST:
gi|5915334|gb|AW052975.1|AW052975EST: CTTTGGAATAACAATGACAGCAAATTTGCTTCTGAACTGGAGCGCTGCAG GTACATTTGCCTCCTACATGATGGTGAGTGCTTTCACTCTCGTCTTCGTCA
genomic: CTTTGGAATAACAATGACAGCAAATTTGCTTCTGAACTGGAGCGCTGCAGgtccatctat ... aatcgtgcagGTACATTTGCCTCCTACATGATGGTGAGTGCTTTCACTCTCGTCTTCGTCA
EST:
gi|60345309|gb|DN212282.1|DN212282EST: CTTTGGAATAACAATGACAGCAAATTTGCTTCTGAACTGGAGCGCTGCAG GTACATTTGCCTCCTACATGATGGTGAGTGCTTTCACTCTCGTCTTCGTCA
genomic: CTTTGGAATAACAATGACAGCAAATTTGCTTCTGAACTGGAGCGCTGCAGgtccatctat ... aatcgtgcagGTACATTTGCCTCCTACATGATGGTGAGTGCTTTCACTCTCGTCTTCGTCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATCAAGTGTGTGGCAGGAAGCTTCGCGACCCTTGCCAACTGGTTGACGTCCTTTGGAATAACAATGACAGCAAATTTGCTTCTGAACTGGAGCGCTGCAGgtccatctatacatctgtgtccatcactagtgtagggtagagtcgtatatgaactaccaaaccatgcgacaggttggtgacctttgtttcctaatcgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG