1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGGTATGAGCTGAAGGGCTGCATCAACGACGTCAAGTGCATGCGCCACCTCCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagatccgcaccctctgttctgcattgctgctctaccgactcctaggaagtcgatcgaattggttggccgcaatttcgggtcaactctttgcctg...
species | Zea mays |
transcript | GRMZM2G155422_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACG AAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAGGGATGGEST: gi|211506870|gb|FL291273.1|FL291273
genomic: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagat ... attcttgcagAAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAGGGATGG
EST: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACG AAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATEST: gi|71325556|gb|DR799469.1|DR799469
genomic: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagat ... attcttgcagAAGAACAAACCGACCCCTACAAAATCCCAACAAAGCAT
EST: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACG AAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAGGGATGGEST: gi|211504519|gb|FL291268.1|FL291268
genomic: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagat ... attcttgcagAAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAGGGATGG
EST: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACG AAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAEST: gi|149058838|gb|EE156859.2|EE156859
genomic: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagat ... attcttgcagAAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATA
EST: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACG AAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAGGGATGGEST: gi|211506866|gb|FL291269.1|FL291269
genomic: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagat ... attcttgcagAAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAGGGATGG
EST: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACG AAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAGGGATGGEST: gi|211504517|gb|FL291266.1|FL291266
genomic: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagat ... attcttgcagAAGAACAAACCGACCCCTACAAAATCCCAACAAAGCATAACATAGGGATGG
EST: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACG AAGAACAAACCGAC
genomic: CCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagat ... attcttgcagAAGAACAAACCGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGTATGAGCTGAAGGGCTGCATCAACGACGTCAAGTGCATGCGCCACCTCCTCATGACGCGCTTCAACTTCCCCGACGACTCCATCATTATGCTCAACGgtccgtagatccgcaccctctgttctgcattgctgctctaccgactcctaggaagtcgatcgaattggttggccgcaatttcgggtcaactctttgcctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccgcacc